RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PSMB5P28074 263 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 EEF1DP29692 281 aaKnown RBP16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 KRTAP10-9P60411 292 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 PRAMEP78395 509 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 TESK1Q15569 626 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 CCDC38Q502W7 563 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 PTRHD1Q6GMV3 140 aaKnown RBP16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 C11orf63Q6NUN7 778 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 RNF44Q7L0R7 432 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 SPPL2CQ8IUH8 684 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 THAP3Q8WTV1 239 aaPredicted RBP16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 CA5BP1Q8WTZ4 195 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 HDAC10Q969S8 669 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 RERGQ96A58 199 aaPredicted RBP16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 ZNF354BQ96LW1 612 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 ZFHX3Q15911 3703 aa16.48■□□□□ 0.23
CHMP4A-211ENST00000609024 A0A1W2PQ72 361 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 GOLGA6L9A6NEM1 432 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 KPNA5O15131 536 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 GPC4O75487 556 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 MED26O95402 600 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 GOT2P00505 430 aaKnown RBP16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 C8orf89P0DMQ9 161 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 CD46P15529 392 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 KIR3DL1P43629 444 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 EMP3P54852 163 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 GRB7Q14451 532 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 AARS2Q5JTZ9 985 aaKnown RBP16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 KCTD11Q693B1 232 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 MEX3BQ6ZN04 569 aaKnown RBP16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 TAB3Q8N5C8 712 aaPredicted RBP16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 OR4L1Q8NH43 312 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 C10orf90Q96M02 699 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 GPR137Q96N19 417 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 PANX3Q96QZ0 392 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 DPH7Q9BTV6 452 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 KLHL1Q9NR64 748 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 COQ3Q9NZJ6 369 aa16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 C19orf25Q9UFG5 118 aaPredicted RBP16.47■□□□□ 0.23
CHMP4A-211ENST00000609024 IQCF5A8MTL0 148 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NPIPA5E9PKD4 350 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 H0YGG7 62 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 MFAP3LO75121 409 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 PHF2O75151 1096 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 SLCO2B1O94956 709 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NADKO95544 446 aaPredicted RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 CCNFP41002 786 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NAP1L1P55209 391 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 ARF3P61204 181 aaPredicted RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 CDH17Q12864 832 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 TSTA3Q13630 321 aaPredicted RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 PCOLCEQ15113 449 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 BTBD16Q32M84 506 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 PPP1R21Q6ZMI0 780 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 FAM71DQ8N9W8 422 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 TMEM178AQ8NBL3 297 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 ADAMTS18Q8TE60 1221 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 UTP23Q9BRU9 249 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 ACAT2Q9BWD1 397 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 TSPAN10Q9H1Z9 355 aaPredicted RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 MRPS30Q9NP92 439 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NPIPA1Q9UND3 350 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NEU2Q9Y3R4 380 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 KLK4Q9Y5K2 254 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 NF1P21359 2839 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 PCNX1Q96RV3 2341 aa16.46■□□□□ 0.23
CHMP4A-211ENST00000609024 LOC102723996A0A087X1L8 192 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 TXNDC9O14530 226 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 PRRG2O14669 202 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 C1orf105O95561 183 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 METTL18O95568 372 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 TSPAN12O95859 305 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 PKMP14618 531 aaKnown RBP16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 AOAHP28039 575 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 RPA3P35244 121 aaPredicted RBP16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 SLC26A3P40879 764 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 BDKRB1P46663 353 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 AVPR1BP47901 424 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 RWDD2BP57060 319 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 GARNL3Q5VVW2 1013 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 OTOAQ7RTW8 1153 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 BEST3Q8N1M1 668 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 HORMAD2Q8N7B1 307 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 OR2A1Q8NGT9 310 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 TGIF2Q9GZN2 237 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 DRC3Q9H069 523 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 KCNK13Q9HB14 408 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 RUVBL1Q9Y265 456 aaKnown RBP16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 PCDHGB6Q9Y5F9 930 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 CPAMD8Q8IZJ3 1885 aa16.45■□□□□ 0.22
CHMP4A-211ENST00000609024 PRMT5O14744 637 aaPredicted RBP16.44■□□□□ 0.22
CHMP4A-211ENST00000609024 SEC24DO94855 1032 aaPredicted RBP16.44■□□□□ 0.22
CHMP4A-211ENST00000609024 SUN1O94901 812 aa16.44■□□□□ 0.22
CHMP4A-211ENST00000609024 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms