RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 DLL4Q9NR61 685 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NLE1Q9NVX2 485 aaPredicted RBP11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLC39A10Q9ULF5 831 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MKL2Q9ULH7 1088 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 H7C0C1 242 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR1I1O60431 355 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ZWINTO95229 277 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FKBP9O95302 570 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SERPINC1P01008 464 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANXA5P08758 320 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR56A5P0C7T3 313 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CD46P15529 392 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MSX1P28360 303 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CCR7P32248 378 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CD96P40200 585 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ATP5OP48047 213 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TFF3Q07654 80 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FASTKQ14296 549 aaKnown RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NR1I3Q14994 352 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CEBPEQ15744 281 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SYT16Q17RD7 645 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 BTBD16Q32M84 506 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 UNC5DQ6UXZ4 953 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GALNTL5Q7Z4T8 443 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 DMRTC2Q8IXT2 367 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MARVELD2Q8N4S9 558 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CSNK1A1LQ8N752 337 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TMEM178AQ8NBL3 297 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR2L3Q8NG85 312 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NINJ1Q92982 152 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MMABQ96EY8 250 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ZNF354BQ96LW1 612 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ZFYVE21Q9BQ24 234 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MKKSQ9NPJ1 570 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KCNN3Q9UGI6 736 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CAPN11Q9UMQ6 739 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RPH3AQ9Y2J0 694 aaPredicted RBP11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ASB1Q9Y576 335 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KLK4Q9Y5K2 254 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NUP210LQ5VU65 1888 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CACNA1CQ13936 2221 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NCOA6Q14686 2063 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 hCG_1818297A0A087WSY0 165 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 A0A0A6YYC8 382 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KRT87PA6NCN2 255 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR51F1A6NGY5 319 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 H0YGG7 62 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 I3L1I5 382 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SPOPO43791 374 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MAN1A2O60476 641 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TOXO94900 526 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TPH1P17752 444 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CHRNB4P30926 498 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PTGER1P34995 402 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC26A3P40879 764 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ARF3P61204 181 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MAT1AQ00266 395 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OC90Q02509 493 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LTBQ06643 244 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 POU6F1Q14863 301 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC18A3Q16572 532 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CES4AQ5XG92 561 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 LANCL3Q6ZV70 420 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CD163Q86VB7 1156 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ASB5Q8WWX0 329 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 METTL21AQ8WXB1 218 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MVB12AQ96EY5 273 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CDKN2AIPNLQ96HQ2 116 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RAB11FIP5Q9BXF6 653 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TGIF2Q9GZN2 237 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ARNT2Q9HBZ2 717 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FEZ2Q9UHY8 353 aaPredicted RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GNPTGQ9UJJ9 305 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RUVBL1Q9Y265 456 aaKnown RBP11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ATRQ13535 2644 aa11.13□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR2A25A4D2G3 310 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GABRR3A8MPY1 467 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SMTNL1A8MU46 457 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NEURL1O76050 574 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SUN1O94901 812 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GYPCP04921 128 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TPOP07202 933 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SP1P08047 785 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FOSL1P15407 271 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 COMTP21964 271 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MSNP26038 577 aaKnown RBP11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC1A1P43005 524 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 BDKRB1P46663 353 aa11.12□□□□□ -0.63
PDLIM1P1-201ENST00000604187 EMP3P54852 163 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms