RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SPNS2Q8IVW8 549 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 CNTN4Q8IWV2 1026 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 MIB2Q96AX9 1013 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 CERS2Q96G23 380 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 SPSB2Q99619 263 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 SMAD5Q99717 465 aaKnown RBP17.3■□□□□ 0.36
CCDC12-208ENST00000603885 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 CTSFQ9UBX1 484 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 CDC23Q9UJX2 597 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 PLAAQ9Y263 795 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 MAU2Q9Y6X3 613 aa17.3■□□□□ 0.36
CCDC12-208ENST00000603885 IGKV1-8A0A0C4DH67 115 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 TTLL8A6PVC2 850 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 H0YGG7 62 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 CCDC188H7C350 402 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 AGPSO00116 658 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 EZRP15311 586 aaKnown RBP17.29■□□□□ 0.36
CCDC12-208ENST00000603885 PAFAH1B1P43034 410 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 CARSP49589 748 aaKnown RBP17.29■□□□□ 0.36
CCDC12-208ENST00000603885 EMP3P54852 163 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-208ENST00000603885 PRTGQ2VWP7 1150 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 THEMIS2Q5TEJ8 643 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 VWA5B1Q5TIE3 1220 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 ZNF425Q6IV72 752 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 ATCAYQ86WG3 371 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 IGDCC3Q8IVU1 814 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 TMEM151BQ8IW70 566 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 GALNT16Q8N428 558 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 MCOLN3Q8TDD5 553 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 COL26A1Q96A83 441 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 CABS1Q96KC9 395 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 ZNF304Q9HCX3 659 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 PPANQ9NQ55 473 aaKnown RBP17.29■□□□□ 0.36
CCDC12-208ENST00000603885 C5AR2Q9P296 337 aa17.29■□□□□ 0.36
CCDC12-208ENST00000603885 PRRC2CQ9Y520 2896 aaKnown RBP17.29■□□□□ 0.36
CCDC12-208ENST00000603885 HEATR5BQ9P2D3 2071 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 MED26O95402 600 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 AHSGP02765 367 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 ALPPP05187 535 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 C8GP07360 202 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 GABRB3P28472 473 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 IMPA1P29218 277 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 ELK3P41970 407 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 SP140Q13342 867 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 MYBPC3Q14896 1274 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 HIF1AQ16665 826 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 HIBCHQ6NVY1 386 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-208ENST00000603885 ADCK2Q7Z695 626 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 GALNT7Q86SF2 657 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 LRRC56Q8IYG6 542 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-208ENST00000603885 MYO1HQ8N1T3 1032 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 DTWD1Q8N5C7 304 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 CSNK1A1LQ8N752 337 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 EEF1AKMT1Q8WVE0 214 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 RERGQ96A58 199 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-208ENST00000603885 LRRC39Q96DD0 335 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 CFAP36Q96G28 342 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 C10orf90Q96M02 699 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 TRIM51Q9BSJ1 452 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 SOX17Q9H6I2 414 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-208ENST00000603885 ATP13A2Q9NQ11 1180 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 CCDC177Q9NQR7 707 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-208ENST00000603885 PYCARDQ9ULZ3 195 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 CHMP2BQ9UQN3 213 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 HECTD1Q9ULT8 2610 aa17.28■□□□□ 0.36
CCDC12-208ENST00000603885 RP1L1Q8IWN7 2480 aaPredicted RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 VSTM2BA6NLU5 285 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 TTI1O43156 1089 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 SORBS2O94875 1100 aaKnown RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 FBLP22087 321 aaKnown RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 CD97P48960 835 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 ITGA8P53708 1063 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 CDKN2DP55273 166 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 ARL4CP56559 192 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 TIAL1Q01085 375 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 RELAQ04206 551 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 OCA2Q04671 838 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 HP1BP3Q5SSJ5 553 aaPredicted RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 RBM20Q5T481 1227 aaKnown RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 TEDDM1Q5T9Z0 273 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 JMJD6Q6NYC1 403 aaPredicted RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 PAQR3Q6TCH7 311 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 SHISA6Q6ZSJ9 500 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 CPT1CQ8TCG5 803 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 MVB12AQ96EY5 273 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 SNF8Q96H20 258 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 VPS50Q96JG6 964 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 CCDC138Q96M89 665 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 PWWP2AQ96N64 755 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 OR2A5Q96R48 311 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 SEMA3GQ9NS98 782 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 STOX2Q9P2F5 926 aaPredicted RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 RNF14Q9UBS8 474 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 ZNF282Q9UDV7 671 aaPredicted RBP17.27■□□□□ 0.36
CCDC12-208ENST00000603885 FBXL4Q9UKA2 621 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 CDC14AQ9UNH5 594 aa17.27■□□□□ 0.36
CCDC12-208ENST00000603885 RUVBL1Q9Y265 456 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms