RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 CXCR2P25025 360 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 RPS9P46781 194 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 RAB28P51157 221 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 CLCA4Q14CN2 919 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 SPATS1Q496A3 300 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 VPS26BQ4G0F5 336 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 USP39Q53GS9 565 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 TMPRSS11BQ86T26 416 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 C17orf64Q86WR6 236 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 KRT78Q8N1N4 520 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 OR2L8Q8NGY9 312 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 PDXPQ96GD0 296 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 CLPTM1LQ96KA5 538 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 HHIPQ96QV1 700 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 IMP3Q9NV31 184 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 BCAP29Q9UHQ4 241 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 PCDHGA7Q9Y5G6 932 aa21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 CFAP20Q9Y6A4 193 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-211ENST00000602848 CFLARO15519 480 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 TNFP01375 233 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 HNRNPH1P31943 449 aaKnown RBP21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 ACTR3P61158 418 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 PHEXP78562 749 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 TSTA3Q13630 321 aaPredicted RBP21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 KPNB1Q14974 876 aaKnown RBP21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 SUSD1Q6UWL2 747 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 PRR23BQ6ZRT6 265 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 MINDY1Q8N5J2 469 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 SH3KBP1Q96B97 665 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 IL17FQ96PD4 163 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 IER2Q9BTL4 223 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 FOXQ1Q9C009 403 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 ACTL8Q9H568 366 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 KIR3DX1Q9H7L2 352 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 NT5DC2Q9H857 520 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 GPR27Q9NS67 375 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 GEMIN8Q9NWZ8 242 aaKnown RBP21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 MAP10Q9P2G4 905 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 MUTYHQ9UIF7 546 aa21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.49■■□□□ 1.03
PPFIA3-211ENST00000602848 BCKDHAP12694 445 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 AMD1P17707 334 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 VARSP26640 1264 aaKnown RBP21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 PKLRP30613 574 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 SERPINB1P30740 379 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 PIK3CBP42338 1070 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 CLNS1AP54105 237 aaKnown RBP21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 CLDN8P56748 225 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 ALG11Q2TAA5 492 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 PIGGQ5H8A4 983 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 CATSPEREQ5SY80 951 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 TPRG1LQ5T0D9 272 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 C1orf146Q5VVC0 180 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 LIX1Q8N485 282 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 CADM4Q8NFZ8 388 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 TEX37Q96LM6 180 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 DPY30Q9C005 99 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 DCLRE1BQ9H816 532 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 TBC1D17Q9HA65 648 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 SPAG4Q9NPE6 437 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 PRDM8Q9NQV8 689 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 C2orf42Q9NWW7 574 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 PLAGL1Q9UM63 463 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 MAPRE3Q9UPY8 281 aa21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 RUVBL1Q9Y265 456 aaKnown RBP21.48■■□□□ 1.03
PPFIA3-211ENST00000602848 MYO1DO94832 1006 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 IL6P05231 212 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 SLBPQ14493 270 aaKnown RBP eCLIP21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 TLR1Q15399 786 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 RETREG3Q86VR2 466 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 FAM129CQ86XR2 697 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 ABHD11Q8NFV4 315 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 WDR60Q8WVS4 1066 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 TSACCQ96A04 125 aaPredicted RBP21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 SIRT5Q9NXA8 310 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 PIPSLA2A3N6 862 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 PRMT3O60678 531 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 NDUFS2O75306 463 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 RASGRP1O95267 797 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 ME2P23368 584 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 IL12AP29459 219 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 DUS1LQ6P1R4 473 aaKnown RBP21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 RIPOR1Q6ZS17 1223 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 DPP10Q8N608 796 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 OR13H1Q8NG92 308 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 HUS1BQ8NHY5 278 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 ZFPM2Q8WW38 1151 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 JADE3Q92613 823 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 STMN2Q93045 179 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 GPATCH1Q9BRR8 931 aaKnown RBP21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 TBC1D29Q9UFV1 150 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 POMPQ9Y244 141 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 TRIOO75962 3097 aa21.47■■□□□ 1.03
PPFIA3-211ENST00000602848 SPTY2D1-AS1A0A0U1RR47 76 aa21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 A0A1W2PPV9 198 aa21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 ENTPD5O75356 428 aa21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 PCNAP12004 261 aa21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 ABATP80404 500 aa21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 ILF3Q12906 894 aaKnown RBP eCLIP21.46■■□□□ 1.03
PPFIA3-211ENST00000602848 ZNF423Q2M1K9 1284 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms