RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OSTF1Q92882 214 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MKKSQ9NPJ1 570 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC7A8Q9UHI5 535 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GNG8Q9UK08 70 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 J3QRK9 145 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 INMTO95050 263 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 NDST2P52849 883 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 UBXN11Q5T124 520 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 AQP11Q8NBQ7 271 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 CD300LFQ8TDQ1 290 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 FBXL8Q96CD0 374 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 FKBPLQ9UIM3 349 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 FZD1Q9UP38 647 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 NUP98P52948 1817 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 C13orf42A0A1B0GVH6 325 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 A0A1B0GVM2 712 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ARL5CA6NH57 179 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF14P17017 642 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GRHL2Q6ISB3 625 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 TTLQ8NG68 377 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 DEC1Q9P2X7 70 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SMIM35A0A1B0GVV1 85 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC7A4O43246 635 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 RAB36O95755 333 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 IGFBP4P22692 258 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 PLPP4Q5VZY2 271 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 PDSS2Q86YH6 399 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC44A3Q8N4M1 653 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GATAD2BQ8WXI9 593 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 TDRD6O60522 2096 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 A0A1W2PQ67 120 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MPIP34949 423 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ADGRD2Q7Z7M1 963 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC51AQ86UW1 340 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 TIGD4Q8IY51 512 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 RGMAQ96B86 450 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 CPNE2Q96FN4 548 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 BARD1Q99728 777 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SNX10Q9Y5X0 201 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 C2orf92A0A1B0GVN3 265 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MMP3P08254 477 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GPR142Q7Z601 462 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 AURKBQ96GD4 344 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 C14orf105Q9NVL8 296 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 EVLQ9UI08 416 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 IRF6O14896 467 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 GDI2P50395 445 aaKnown RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC10A7Q0GE19 358 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ASTE1Q2TB18 679 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 BTBD16Q32M84 506 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 KIAA0930Q6ICG6 404 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 IRF2BP1Q8IU81 584 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SEC14L1Q92503 715 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SPATA7Q9P0W8 599 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 VNN2O95498 520 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 F8A1P23610 371 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF101Q8IZC7 436 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 ZBTB8BQ8NAP8 495 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-217ENST00000602723 CCL16O15467 120 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 E2F1Q01094 437 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ERVK-11Q9UQG0 969 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 SETD1AO15047 1707 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 MROH1Q8NDA8 1641 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 A0A1W2PRQ8 180 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF878C9JN71 531 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 XPNPEP2O43895 674 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TRMT61BQ9BVS5 477 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 GLIS2Q9BZE0 524 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 WASHC1A8K0Z3 465 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 WASH3PC4AMC7 463 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 WASH2PQ6VEQ5 465 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF565Q8N9K5 539 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TRPM4Q8TD43 1214 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 HSH2DQ96JZ2 352 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ELOVL2Q9NXB9 296 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 SLC17A6Q9P2U8 582 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 C2CD4BA6NLJ0 364 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 GABRDO14764 452 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ECI2O75521 394 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ENGP17813 658 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms