RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HOMER3Q9NSC5 361 aa16.98■□□□□ 0.31
SHKBP1-227ENST00000602011 RIC8BQ9NVN3 520 aa16.98■□□□□ 0.31
SHKBP1-227ENST00000602011 A0A1W2PPV9 198 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 E2F3O00716 465 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 WFS1O76024 890 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 KLHL18O94889 574 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 ERGP11308 486 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 PAMP19021 973 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 RPA3P35244 121 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 RPL22P35268 128 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 EIF3BP55884 814 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 PRDX1Q06830 199 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 Q0VFX4 171 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 GBX1Q14549 363 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 TYSND1Q2T9J0 566 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 FRMPD2BQ6IN97 320 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 MTFR2Q6P444 385 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 LRRC8BQ6P9F7 803 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 LINC00696Q6ZRV3 163 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 SHISA6Q6ZSJ9 500 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 NEK10Q6ZWH5 1172 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 RERGQ96A58 199 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 CABS1Q96KC9 395 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 BIRC8Q96P09 236 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 EBNA1BP2Q99848 306 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 RNF32Q9H0A6 362 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 ZNF160Q9HCG1 818 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 MRPS30Q9NP92 439 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 CIDEBQ9UHD4 219 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 NFS1Q9Y697 457 aa16.97■□□□□ 0.31
SHKBP1-227ENST00000602011 DOCK10Q96BY6 2186 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 LOC105369274A0A096LPK9 316 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 LOC102723532A0A0G2JNH3 316 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 ARHGAP10A1A4S6 786 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 MAGEB16A2A368 324 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 IDSB3KWA1 339 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 H0YGG7 62 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 MYO1CO00159 1063 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 JRKO75564 520 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 CRYABP02511 175 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 ANXA5P08758 320 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 PRR35P0CG20 571 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 POU3F2P20265 443 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 CHRM3P20309 590 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 OGNP20774 298 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 HRH2P25021 359 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 SOX11P35716 441 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 SLC26A3P40879 764 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 TNFSF10P50591 281 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 ARF3P61204 181 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 SNX1Q13596 522 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 FAM53BQ14153 422 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 NDUFA9Q16795 377 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 ZNF324BQ6AW86 544 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 CNSTQ6PJW8 725 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 TMEM139Q8IV31 216 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 OR4N4Q8N0Y3 316 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 OTUD6BQ8N6M0 293 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 FBXO15Q8NCQ5 510 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 SUN3Q8TAQ9 357 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 TEKT2Q9UIF3 430 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 CAPN6Q9Y6Q1 641 aa16.96■□□□□ 0.31
SHKBP1-227ENST00000602011 SNRNP200O75643 2136 aaKnown RBP16.96■□□□□ 0.3
SHKBP1-227ENST00000602011 LOC102723996A0A087X1L8 192 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 PSIP1O75475 530 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 VAPBO95292 243 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 HEXBP07686 556 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 ETS1P14921 441 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 EZRP15311 586 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 TPSB2P20231 275 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 NMBRP28336 390 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 FMO4P31512 558 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 BDKRB1P46663 353 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 NAA30Q147X3 362 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 TPSAB1Q15661 275 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 CCSMST1Q4G0I0 132 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 VWA2Q5GFL6 755 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 GSTA5Q7RTV2 222 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 METTL27Q8N6F8 245 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 CSNK1A1LQ8N752 337 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 PSMF1Q92530 271 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 MOCOSQ96EN8 888 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 SOX13Q9UN79 622 aa16.95■□□□□ 0.3
SHKBP1-227ENST00000602011 SVILO95425 2214 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 ANKRD17O75179 2603 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 IGHV1-45A0A0A0MS14 117 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 E5RI56 91 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 COX6A1P12074 109 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 PSMB5P28074 263 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 BASP1P80723 227 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 ART3Q13508 389 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 CTSL3PQ5NE16 218 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 MEI1Q5TIA1 1274 aa16.94■□□□□ 0.3
SHKBP1-227ENST00000602011 SP5Q6BEB4 398 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms