RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 UBE2E3Q969T4 207 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 C3orf30Q96M34 536 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 FRG2BQ96QU4 278 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ZFP69BQ9UJL9 534 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 GON4LQ3T8J9 2241 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 SLC28A1O00337 649 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 PRICKLE3O43900 615 aaPredicted RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 SYPP08247 313 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 CXCR2P25025 360 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 CMPK1P30085 196 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 CCR8P51685 355 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 SF1Q15637 639 aaKnown RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 C14orf28Q4W4Y0 310 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 SGO1Q5FBB7 561 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 C10orf62Q5T681 223 aaPredicted RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 SCIMPQ6UWF3 145 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 C17orf82Q86X59 251 aaPredicted RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 SLC25A45Q8N413 288 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 ERP27Q96DN0 273 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 PRR11Q96HE9 360 aaPredicted RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 UCK1Q9HA47 277 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 MRPS30Q9NP92 439 aaKnown RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 GEMIN8Q9NWZ8 242 aaKnown RBP21.76■■□□□ 1.07
IRF3-228ENST00000601291 SPHK1Q9NYA1 384 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 ENTPD2Q9Y5L3 495 aa21.76■■□□□ 1.07
IRF3-228ENST00000601291 OR6C74A6NCV1 312 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 CCT8L1PA6NM43 557 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 BTN3A3O00478 584 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 FCHO1O14526 889 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 RGS14O43566 566 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 EPN2O95208 641 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 CER1O95813 267 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 NCF2P19878 526 aaPredicted RBP21.75■■□□□ 1.07
IRF3-228ENST00000601291 PEBP1P30086 187 aaKnown RBP21.75■■□□□ 1.07
IRF3-228ENST00000601291 IMPG1Q17R60 797 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 FOXR1Q6PIV2 292 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 C6orf89Q6UWU4 347 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 LARP4Q71RC2 724 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■■□□□ 13.6
IRF3-228ENST00000601291 ZNF771Q7L3S4 317 aaPredicted RBP21.75■■□□□ 1.07
IRF3-228ENST00000601291 ARL10Q8N8L6 244 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 GPR156Q8NFN8 814 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 ABHD11Q8NFV4 315 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 OR10G6Q8NH81 332 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 HBEGFQ99075 208 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 AIF1LQ9BQI0 150 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 NMUR2Q9GZQ4 415 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 GAREM1Q9H706 876 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 AKTIPQ9H8T0 292 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 PRM3Q9NNZ6 103 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 FARSBQ9NSD9 589 aaKnown RBP21.75■■□□□ 1.07
IRF3-228ENST00000601291 PCDHGA5Q9Y5G8 931 aa21.75■■□□□ 1.07
IRF3-228ENST00000601291 PATE3B3GLJ2 98 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 PDYNP01213 254 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 ALPPL2P10696 532 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 HRH2P25021 359 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 CCT8P50990 548 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 ATP6AP1LQ52LC2 224 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 SPDYAQ5MJ70 313 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 KLHL35Q6PF15 583 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 TRIM46Q7Z4K8 759 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 OOSP2Q86WS3 158 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 FITM2Q8N6M3 262 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 GBP7Q8N8V2 638 aaPredicted RBP21.74■■□□□ 1.07
IRF3-228ENST00000601291 KYQ8NBH2 561 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 OR2L3Q8NG85 312 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 MTFMTQ96DP5 389 aaKnown RBP21.74■■□□□ 1.07
IRF3-228ENST00000601291 SLC38A3Q99624 504 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 DUSP23Q9BVJ7 150 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 PITHD1Q9GZP4 211 aaPredicted RBP21.74■■□□□ 1.07
IRF3-228ENST00000601291 FSCN3Q9NQT6 498 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 CUEDC1Q9NWM3 386 aaPredicted RBP21.74■■□□□ 1.07
IRF3-228ENST00000601291 NLGN3Q9NZ94 848 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 TDRD6O60522 2096 aaKnown RBP21.74■■□□□ 1.07
IRF3-228ENST00000601291 TTC28Q96AY4 2481 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 GSAPA4D1B5 854 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 ERICH4A6NGS2 130 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 LILRA5A6NI73 299 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 C2orf74A8MZ97 194 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 ARHGAP33O14559 1287 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 PCNAP12004 261 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 LBPP18428 481 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 MPLP40238 635 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 NR6A1Q15406 480 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 ADCK2Q7Z695 626 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 FAM129CQ86XR2 697 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 LAS2Q8IYD9 372 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 OR7G3Q8NG95 312 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 WDR20Q8TBZ3 569 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 TWSG1Q9GZX9 223 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 MYLK2Q9H1R3 596 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 MRGBPQ9NV56 204 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 R4GN57 208 aa21.74■■□□□ 1.07
IRF3-228ENST00000601291 SERTM1A2A2V5 107 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 H7BY64 318 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 UBDO15205 165 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 PPM1DO15297 605 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 POLR2CP19387 275 aaPredicted RBP21.73■■□□□ 1.07
IRF3-228ENST00000601291 PHEXP78562 749 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 CSTF3Q12996 717 aaKnown RBP21.73■■□□□ 1.07
IRF3-228ENST00000601291 ARMC6Q6NXE6 501 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms