RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 EZRP15311 586 aaKnown RBP15.08■□□□□ 0
VRK3-221ENST00000600284 TCP1P17987 556 aaKnown RBP15.08■□□□□ 0
VRK3-221ENST00000600284 PGAM1P18669 254 aa15.08■□□□□ 0
VRK3-221ENST00000600284 HRH2P25021 359 aa15.08■□□□□ 0
VRK3-221ENST00000600284 OR1D4P47884 311 aa15.08■□□□□ 0
VRK3-221ENST00000600284 FOXL2P58012 376 aa15.08■□□□□ 0
VRK3-221ENST00000600284 ARF3P61204 181 aaPredicted RBP15.08■□□□□ 0
VRK3-221ENST00000600284 YBX1P67809 324 aaKnown RBP15.08■□□□□ 0
VRK3-221ENST00000600284 SRSF1Q07955 248 aaKnown RBP eCLIP15.08■□□□□ 0
VRK3-221ENST00000600284 HSP90AA5PQ58FG0 334 aa15.08■□□□□ 0
VRK3-221ENST00000600284 GARNL3Q5VVW2 1013 aa15.08■□□□□ 0
VRK3-221ENST00000600284 PRAMEF13Q5VWM6 474 aa15.08■□□□□ 0
VRK3-221ENST00000600284 ZNF425Q6IV72 752 aa15.08■□□□□ 0
VRK3-221ENST00000600284 KIRREL2Q6UWL6 708 aa15.08■□□□□ 0
VRK3-221ENST00000600284 KCNMB4Q86W47 210 aa15.08■□□□□ 0
VRK3-221ENST00000600284 ZADH2Q8N4Q0 377 aa15.08■□□□□ 0
VRK3-221ENST00000600284 CD200R1Q8TD46 325 aa15.08■□□□□ 0
VRK3-221ENST00000600284 COL26A1Q96A83 441 aa15.08■□□□□ 0
VRK3-221ENST00000600284 GPR21Q99679 349 aa15.08■□□□□ 0
VRK3-221ENST00000600284 EBNA1BP2Q99848 306 aaKnown RBP15.08■□□□□ 0
VRK3-221ENST00000600284 AARSD1Q9BTE6 412 aaKnown RBP15.08■□□□□ 0
VRK3-221ENST00000600284 GRPEL1Q9HAV7 217 aa15.08■□□□□ 0
VRK3-221ENST00000600284 CTSFQ9UBX1 484 aa15.08■□□□□ 0
VRK3-221ENST00000600284 TAC3Q9UHF0 121 aa15.08■□□□□ 0
VRK3-221ENST00000600284 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
VRK3-221ENST00000600284 FBXL4Q9UKA2 621 aa15.08■□□□□ 0
VRK3-221ENST00000600284 B3GNT3Q9Y2A9 372 aa15.08■□□□□ 0
VRK3-221ENST00000600284 HS3ST3B1Q9Y662 390 aa15.08■□□□□ 0
VRK3-221ENST00000600284 IGKV1-8A0A0C4DH67 115 aa15.07■□□□□ 0
VRK3-221ENST00000600284 DNALI1O14645 258 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 NRP2O60462 931 aa15.07■□□□□ 0
VRK3-221ENST00000600284 ZGLP1P0C6A0 271 aa15.07■□□□□ 0
VRK3-221ENST00000600284 CUL1Q13616 776 aa15.07■□□□□ 0
VRK3-221ENST00000600284 TSTA3Q13630 321 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 RBBP7Q16576 425 aa15.07■□□□□ 0
VRK3-221ENST00000600284 TUBB8Q3ZCM7 444 aa15.07■□□□□ 0
VRK3-221ENST00000600284 PLEKHN1Q494U1 663 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 TMEM151BQ8IW70 566 aa15.07■□□□□ 0
VRK3-221ENST00000600284 LRRC56Q8IYG6 542 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 IQCKQ8N0W5 287 aa15.07■□□□□ 0
VRK3-221ENST00000600284 C2CD4AQ8NCU7 369 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 STT3BQ8TCJ2 826 aa15.07■□□□□ 0
VRK3-221ENST00000600284 MIEF2Q96C03 454 aa15.07■□□□□ 0
VRK3-221ENST00000600284 CABS1Q96KC9 395 aa15.07■□□□□ 0
VRK3-221ENST00000600284 C10orf90Q96M02 699 aa15.07■□□□□ 0
VRK3-221ENST00000600284 OR2A5Q96R48 311 aa15.07■□□□□ 0
VRK3-221ENST00000600284 SLC29A3Q9BZD2 475 aa15.07■□□□□ 0
VRK3-221ENST00000600284 SOX17Q9H6I2 414 aaPredicted RBP15.07■□□□□ 0
VRK3-221ENST00000600284 IARS2Q9NSE4 1012 aaKnown RBP15.07■□□□□ 0
VRK3-221ENST00000600284 ASIC3Q9UHC3 531 aa15.07■□□□□ 0
VRK3-221ENST00000600284 MAU2Q9Y6X3 613 aa15.07■□□□□ 0
VRK3-221ENST00000600284 PCM1Q15154 2024 aa15.07■□□□□ 0
VRK3-221ENST00000600284 HECTD1Q9ULT8 2610 aa15.07■□□□□ 0
VRK3-221ENST00000600284 SMAPO00193 183 aa15.06■□□□□ 0
VRK3-221ENST00000600284 PCDH17O14917 1159 aa15.06■□□□□ 0
VRK3-221ENST00000600284 MED26O95402 600 aa15.06■□□□□ 0
VRK3-221ENST00000600284 SYF2O95926 243 aaKnown RBP15.06■□□□□ 0
VRK3-221ENST00000600284 GNLYP22749 145 aa15.06■□□□□ 0
VRK3-221ENST00000600284 ITGA3P26006 1051 aa15.06■□□□□ 0
VRK3-221ENST00000600284 RGS4P49798 205 aa15.06■□□□□ 0
VRK3-221ENST00000600284 MPP1Q00013 466 aa15.06■□□□□ 0
VRK3-221ENST00000600284 KLC1Q07866 573 aa15.06■□□□□ 0
VRK3-221ENST00000600284 CRYMQ14894 314 aa15.06■□□□□ 0
VRK3-221ENST00000600284 SPANXN3Q5MJ09 141 aa15.06■□□□□ 0
VRK3-221ENST00000600284 FHL5Q5TD97 284 aa15.06■□□□□ 0
VRK3-221ENST00000600284 IRAK1BP1Q5VVH5 260 aa15.06■□□□□ 0
VRK3-221ENST00000600284 IGFL2Q6UWQ7 119 aa15.06■□□□□ 0
VRK3-221ENST00000600284 Q6ZS92 163 aa15.06■□□□□ 0
VRK3-221ENST00000600284 KIAA0408Q6ZU52 694 aa15.06■□□□□ 0
VRK3-221ENST00000600284 UBE2R2Q712K3 238 aaPredicted RBP15.06■□□□□ 0
VRK3-221ENST00000600284 GALNT7Q86SF2 657 aa15.06■□□□□ 0
VRK3-221ENST00000600284 CNTN4Q8IWV2 1026 aa15.06■□□□□ 0
VRK3-221ENST00000600284 CPNE9Q8IYJ1 553 aa15.06■□□□□ 0
VRK3-221ENST00000600284 METTL27Q8N6F8 245 aaPredicted RBP15.06■□□□□ 0
VRK3-221ENST00000600284 CSNK1A1LQ8N752 337 aa15.06■□□□□ 0
VRK3-221ENST00000600284 PPFIBP2Q8ND30 876 aa15.06■□□□□ 0
VRK3-221ENST00000600284 OR11G2Q8NGC1 345 aa15.06■□□□□ 0
VRK3-221ENST00000600284 MCOLN3Q8TDD5 553 aa15.06■□□□□ 0
VRK3-221ENST00000600284 RERGQ96A58 199 aaPredicted RBP15.06■□□□□ 0
VRK3-221ENST00000600284 CCDC138Q96M89 665 aa15.06■□□□□ 0
VRK3-221ENST00000600284 RUNDC3BQ96NL0 473 aa15.06■□□□□ 0
VRK3-221ENST00000600284 CRB3Q9BUF7 120 aa15.06■□□□□ 0
VRK3-221ENST00000600284 PCBD2Q9H0N5 130 aa15.06■□□□□ 0
VRK3-221ENST00000600284 TAS2R13Q9NYV9 303 aa15.06■□□□□ 0
VRK3-221ENST00000600284 TRMT6Q9UJA5 497 aaKnown RBP15.06■□□□□ 0
VRK3-221ENST00000600284 C8GP07360 202 aa15.05■□□□□ -0
VRK3-221ENST00000600284 F7P08709 466 aaPredicted RBP15.05■□□□□ -0
VRK3-221ENST00000600284 FBLP22087 321 aaKnown RBP15.05■□□□□ -0
VRK3-221ENST00000600284 IMPA1P29218 277 aa15.05■□□□□ -0
VRK3-221ENST00000600284 UQCRFS1P47985 274 aa15.05■□□□□ -0
VRK3-221ENST00000600284 DHX9Q08211 1270 aaKnown RBP15.05■□□□□ -0
VRK3-221ENST00000600284 DSG2Q14126 1118 aa15.05■□□□□ -0
VRK3-221ENST00000600284 FAM53BQ14153 422 aa15.05■□□□□ -0
VRK3-221ENST00000600284 AGAP7PQ5VUJ5 663 aa15.05■□□□□ -0
VRK3-221ENST00000600284 ATG9BQ674R7 924 aa15.05■□□□□ -0
VRK3-221ENST00000600284 SHISA6Q6ZSJ9 500 aa15.05■□□□□ -0
VRK3-221ENST00000600284 SYDE1Q6ZW31 735 aaPredicted RBP15.05■□□□□ -0
VRK3-221ENST00000600284 AGAP4Q96P64 663 aa15.05■□□□□ -0
VRK3-221ENST00000600284 PSMG3-AS1Q96PY0 264 aa15.05■□□□□ -0
VRK3-221ENST00000600284 TGIF2Q9GZN2 237 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms