RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 DHCR7Q9UBM7 475 aaKnown RBP14.58□□□□□ -0.08
LIG1-219ENST00000600055 OARD1Q9Y530 152 aa14.58□□□□□ -0.08
LIG1-219ENST00000600055 PKD1L2Q7Z442 2459 aa14.58□□□□□ -0.08
LIG1-219ENST00000600055 DSPP15924 2871 aaKnown RBP14.58□□□□□ -0.08
LIG1-219ENST00000600055 CACNA1BQ00975 2339 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 A0A087WUV0 522 aaPredicted RBP14.57□□□□□ -0.08
LIG1-219ENST00000600055 POC1B-GALNT4F8VUJ3 575 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 H7BY64 318 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 HAT1O14929 419 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 KATNA1O75449 491 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 PMS2P54278 862 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ABATP80404 500 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 DNASE1L3Q13609 305 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 OR4D1Q15615 310 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 TLDC1Q6P9B6 456 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 FRA10AC1Q70Z53 315 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ADCK2Q7Z695 626 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ADAMTSL2Q86TH1 951 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 PLD3Q8IV08 490 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 SNRNP27Q8WVK2 155 aaKnown RBP14.57□□□□□ -0.08
LIG1-219ENST00000600055 PTERQ96BW5 349 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 SLC45A3Q96JT2 553 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 LRFN5Q96NI6 719 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ZNF285Q96NJ3 590 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 PRAP1Q96NZ9 151 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 OR4K3Q96R72 315 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 PAFAH2Q99487 392 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 EGFL8Q99944 293 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ZFYVE21Q9BQ24 234 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ANKZF1Q9H8Y5 726 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 SNX15Q9NRS6 342 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 ANKMY1Q9P2S6 941 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 AP1M2Q9Y6Q5 423 aa14.57□□□□□ -0.08
LIG1-219ENST00000600055 NCF1BA6NI72 391 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 NCF1CA8MVU1 366 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 H0YGG7 62 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 NKX2-8O15522 239 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 RIPK2O43353 540 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 EIF2S1P05198 315 aaKnown RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 C2P06681 752 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 KLK3P07288 261 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 INHBAP08476 426 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 CDH1P12830 882 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 NCF1P14598 390 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 NPPBP16860 134 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 CRABP2P29373 138 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 GCGRP47871 477 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 KCNC1P48547 511 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 CSRP3P50461 194 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 ARF3P61204 181 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 RPS18P62269 152 aaKnown RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 IRF9Q00978 393 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 NAA25Q14CX7 972 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 WASHC2DQ5SRD0 308 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 ZNF385CQ66K41 422 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 CAPN13Q6MZZ7 669 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 RHBDD2Q6NTF9 364 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 LCTLQ6UWM7 567 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 ZNF517Q6ZMY9 492 aaPredicted RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 TRMT10CQ7L0Y3 403 aaKnown RBP14.56□□□□□ -0.08
LIG1-219ENST00000600055 DTWD1Q8N5C7 304 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 ZSCAN1Q8NBB4 408 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 DCAKDQ8WVC6 231 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 ATL1Q8WXF7 558 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 STARD8Q92502 1023 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 NXNL1Q96CM4 212 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 PCBD2Q9H0N5 130 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 IGSF5Q9NSI5 407 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 SNX7Q9UNH6 387 aa14.56□□□□□ -0.08
LIG1-219ENST00000600055 SRPX2O60687 465 aaPredicted RBP14.55□□□□□ -0.08
LIG1-219ENST00000600055 MED26O95402 600 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 STATHP02808 62 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ALDOAP04075 364 aaKnown RBP14.55□□□□□ -0.08
LIG1-219ENST00000600055 CAPN1P07384 714 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ANXA5P08758 320 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ABHD2P08910 425 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 HBQ1P09105 142 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 PRKAR1AP10644 381 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 TFEBP19484 476 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 CCND1P24385 295 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 MSH2P43246 934 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ATP6V0D1P61421 351 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 CSNK1G2P78368 415 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 CDKL1Q00532 357 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 NFKB2Q00653 900 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 TGFBIQ15582 683 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 FBXO48Q5FWF7 155 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 TCTE1Q5JU00 501 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 ATP1A1-AS1Q5TC04 95 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 FAM69BQ5VUD6 431 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 C16orf46Q6P387 395 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 FAM198BQ6UWH4 519 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 TTLL10Q6ZVT0 673 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 C17orf64Q86WR6 236 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 GPSM1Q86YR5 675 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 CENPLQ8N0S6 344 aaPredicted RBP14.55□□□□□ -0.08
LIG1-219ENST00000600055 KCTD4Q8WVF5 259 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 KIAA1191Q96A73 305 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 RHBDF1Q96CC6 855 aa14.55□□□□□ -0.08
LIG1-219ENST00000600055 GBP5Q96PP8 586 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms