RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 NCF1CA8MVU1 366 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 CDRT15L2A8MXV6 281 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 UBXN8O00124 270 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 TNFSF15O95150 251 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 CCL4P13236 92 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 NCF1P14598 390 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PSMB5P28074 263 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 NAA20P61599 178 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 NFKB2Q00653 900 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PCDH1Q08174 1060 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 CDC16Q13042 620 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 SETDB1Q15047 1291 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PCBP2Q15366 365 aaKnown RBP eCLIP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 TCTE1Q5JU00 501 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 TRIM73Q86UV7 250 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 DNAJC22Q8N4W6 341 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 OR4K1Q8NGD4 311 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 RDH11Q8TC12 318 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 N4BP2L2Q92802 583 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PYCR2Q96C36 320 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PPM1MQ96MI6 270 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 OR6C1Q96RD1 312 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 SMC6Q96SB8 1091 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 SARGQ9BW04 601 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 IQCGQ9H095 443 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 SSU72Q9NP77 194 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 DNAJC11Q9NVH1 559 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC22A14Q9Y267 594 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 AK5Q9Y6K8 562 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 PTPRBP23467 1997 aa15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 KCNE1BA0A087WTH5 132 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TMEM8BA6NDV4 472 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 GOLGA8RI6L899 631 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 K7EPI3 171 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TXNDC9O14530 226 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TAPBPO15533 448 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 KATNA1O75449 491 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 WDR47O94967 919 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 EBLN1P0CF75 366 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 PVRP15151 417 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 FOLR1P15328 257 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 SPINK2P20155 84 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 CXCR2P25025 360 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 GMPRP36959 345 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 CCR8P51685 355 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 FOXM1Q08050 763 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 ZIC1Q15915 447 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 PDK4Q16654 411 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 PFKFB4Q16877 469 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TNFAIP8L3Q5GJ75 292 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 FCRL6Q6DN72 434 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 CDHR3Q6ZTQ4 885 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 RNF44Q7L0R7 432 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 HDXQ7Z353 690 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 PAQR7Q86WK9 346 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC22A9Q8IVM8 553 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 GPR135Q8IZ08 494 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TMEM151AQ8N4L1 468 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC5A11Q8WWX8 675 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 GATA6Q92908 595 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 ZNF501Q96CX3 271 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 APOPT1Q96IL0 206 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 SEC16BQ96JE7 1060 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 ZFYVE21Q9BQ24 234 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TMEM79Q9BSE2 394 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 PELI2Q9HAT8 420 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 ASCL3Q9NQ33 180 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 ZNF358Q9NW07 568 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 TMEM216Q9P0N5 145 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 OPTCQ9UBM4 332 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 AP1M2Q9Y6Q5 423 aa15.9■□□□□ 0.14
SHKBP1-219ENST00000599575 IGKV1-8A0A0C4DH67 115 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 HBQ1P09105 142 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 EPB42P16452 691 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 ITIH1P19827 911 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 ATP5F1P24539 256 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 GSTM2P28161 218 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 GABRA4P48169 554 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 MAPK10P53779 464 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 EMP3P54852 163 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 ITGA1P56199 1179 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 RPS15AP62244 130 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 SH3BP2P78314 561 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 TBCCQ15814 346 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 YOD1Q5VVQ6 348 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 TLDC1Q6P9B6 456 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 FOXR1Q6PIV2 292 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 MCATQ8IVS2 390 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 SRRM1Q8IYB3 904 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 BANPQ8N9N5 519 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 EXT2Q93063 718 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 ZNF285Q96NJ3 590 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 C1QTNF3Q9BXJ4 246 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 FAM117AQ9C073 453 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 FAM60AQ9NP50 221 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 SLC6A20Q9NP91 592 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 CPSF2Q9P2I0 782 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 PILRAQ9UKJ1 303 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms