RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 SLC25A37Q9NYZ2 338 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 GPRC5BQ9NZH0 403 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 VPS29Q9UBQ0 182 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 MUTYHQ9UIF7 546 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 DTNAQ9Y4J8 743 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 CFAP20Q9Y6A4 193 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 PLRG1O43660 514 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 HOXB2P14652 356 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 PNLIPRP1P54315 467 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 RPS21P63220 83 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 ZNF33BQ06732 778 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 RPA4Q13156 261 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 TMEM259Q4ZIN3 620 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 METRNLQ641Q3 311 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 RIMKLAQ8IXN7 391 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 C2orf73Q8N5S3 287 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 HUS1BQ8NHY5 278 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 N4BP2L2Q92802 583 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 IKZF5Q9H5V7 419 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 ITM2CQ9NQX7 267 aa16.46■□□□□ 0.23
SHKBP1-216ENST00000598201 AQP12BA6NM10 295 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 DNTTP04053 509 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 CAPNS1P04632 268 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 PCNAP12004 261 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 MAPK1P28482 360 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 ADPRHP54922 357 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 GTDC1Q4AE62 458 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 SDE2Q6IQ49 451 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 PRR23BQ6ZRT6 265 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 TMEM126BQ8IUX1 230 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 AQP12AQ8IXF9 295 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 TFGQ92734 400 aaPredicted RBP16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 C11orf24Q96F05 449 aaPredicted RBP16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 SEMA6AQ9H2E6 1030 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 SERHLQ9NQF3 203 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 PCDHGA11Q9Y5H2 935 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 SNX13Q9Y5W8 968 aa16.46■□□□□ 0.22
SHKBP1-216ENST00000598201 ACPPP15309 386 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 HRH2P25021 359 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 RPL10P27635 214 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 OXTRP30559 389 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 MAT2AP31153 395 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 SGCGQ13326 291 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 FXNQ16595 210 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 HMBOX1Q6NT76 420 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 HHIPQ96QV1 700 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 TRIM15Q9C019 465 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 SPNS1Q9H2V7 528 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 FZD3Q9NPG1 666 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 TDRKHQ9Y2W6 561 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 PIAS3Q9Y6X2 628 aa16.45■□□□□ 0.22
SHKBP1-216ENST00000598201 KMOO15229 486 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 LATO43561 262 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 RNGTTO60942 597 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TIPRLO75663 272 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TEAD1P28347 426 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 HTR1EP28566 365 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 IGFALSP35858 605 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 MEF2AQ02078 507 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 SLBPQ14493 270 aaKnown RBP eCLIP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 PGS1Q32NB8 556 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 MED27Q6P2C8 311 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CHST15Q7LFX5 561 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 AMIGO2Q86SJ2 522 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ANKRD46Q86W74 232 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 OR8J3Q8NGG0 315 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 RAD51AP1Q96B01 352 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 WDR34Q96EX3 536 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 BRF2Q9HAW0 419 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CCDC177Q9NQR7 707 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CCM2LQ9NUG4 571 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 DYRK1BQ9Y463 629 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 DNMT3AQ9Y6K1 912 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CROCCQ5TZA2 2017 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TRBV5-3A0A0A0MS03 114 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TCRBV5S2A0A599 114 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 DHRS12A0PJE2 317 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 AKAP10O43572 662 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 C1GALT1C1LP0DN25 315 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 S100A3P33764 101 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CLNS1AP54105 237 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 RPS13P62277 151 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 RAE1P78406 368 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ATG9BQ674R7 924 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 DUS1LQ6P1R4 473 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 EGFL6Q8IUX8 553 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 DCUN1D3Q8IWE4 304 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ADGRG5Q8IZF4 528 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ADCY4Q8NFM4 1077 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TESCQ96BS2 214 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ZNF583Q96ND8 569 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 MYOCQ99972 504 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 INPP5KQ9BT40 448 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 PAIP1Q9H074 479 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 MUC13Q9H3R2 512 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms