RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	FAR1	Q8WVX9	515 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	PLCD4	Q9BRC7	762 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	YIPF2	Q9BWQ6	316 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	PTGFRN	Q9P2B2	879 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	TRPC4	Q9UBN4	977 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	RUVBL1	Q9Y265	456 aa	Known RBP	10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	MRFAP1	Q9Y605	127 aa		10.03	□□□□□ -0.8
LSM4-205	ENST00000597776	IGLV3-12	A0A075B6K2	115 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	NSG1	A0A0A6YYJ2	146 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	IDS	B3KWA1	339 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	MYO1C	O00159	1063 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PSIP1	O75475	530 aa	Known RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	F10	P00742	488 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	FGG	P02679	453 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	STATH	P02808	62 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	ESR1	P03372	595 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	CELA2A	P08217	269 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PRR35	P0CG20	571 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	COX6A1	P12074	109 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	EDN3	P14138	238 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	CHRM3	P20309	590 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	ATP5D	P30049	168 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	CDC25B	P30305	580 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	RPA3	P35244	121 aa	Predicted RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	VPS41	P49754	854 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	EMP2	P54851	167 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	SNRPN	P63162	240 aa	Known RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	DSG2	Q14126	1118 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	KCNJ11	Q14654	390 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	KLHL38	Q2WGJ6	581 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	RNF187	Q5TA31	235 aa	Predicted RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	LRRC8B	Q6P9F7	803 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	FAM180A	Q6UWF9	173 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	CENPU	Q71F23	418 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PAQR7	Q86WK9	346 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	KBTBD2	Q8IY47	623 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	SIRT6	Q8N6T7	355 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	AMER3	Q8N944	861 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PPFIBP2	Q8ND30	876 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	OR1N1	Q8NGS0	311 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	BRIX1	Q8TDN6	353 aa	Known RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	COG1	Q8WTW3	980 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	SMPDL3A	Q92484	453 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PSMF1	Q92530	271 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	VPS50	Q96JG6	964 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PKP4	Q99569	1192 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	SLC30A3	Q99726	388 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	MRPS30	Q9NP92	439 aa	Known RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	ABCF3	Q9NUQ8	709 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	PLA2G3	Q9NZ20	509 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	TAC3	Q9UHF0	121 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	SOX13	Q9UN79	622 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	DRG1	Q9Y295	367 aa	Known RBP	10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	POLE	Q07864	2286 aa		10.02	□□□□□ -0.81
LSM4-205	ENST00000597776	CACNA1D	Q01668	2161 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776		A0A0A6YYC8	382 aa	Predicted RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776		E5RI56	91 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776		H3BMM5	538 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776		I3L1I5	382 aa	Predicted RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	AP3B1	O00203	1094 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	P2RX6	O15547	441 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ZG16	O60844	167 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	VPS26A	O75436	327 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	USP1	O94782	785 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	SLC16A8	O95907	504 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	PKM	P14618	531 aa	Known RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	TPSB2	P20231	275 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	OGN	P20774	298 aa	Known RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CXCR5	P32302	372 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	EFNA3	P52797	238 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	PNLIPRP1	P54315	467 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ARG2	P78540	354 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CDK16	Q00536	496 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CUL1	Q13616	776 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	NAA25	Q14CX7	972 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	TPSAB1	Q15661	275 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	SYT16	Q17RD7	645 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ANKRD20A4	Q4UJ75	823 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ANKRD22	Q5VYY1	191 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ICE2	Q659A1	982 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ZNF425	Q6IV72	752 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CASC4	Q6P4E1	433 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	C4orf22	Q6V702	233 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	NDUFAF7	Q7L592	441 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	CILP2	Q8IUL8	1156 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	PLD3	Q8IV08	490 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	REXO1L1P	Q8IX06	675 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	ARHGEF39	Q8N4T4	335 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	GIMAP7	Q8NHV1	300 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	MMAB	Q96EY8	250 aa	Predicted RBP	10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	LMF1	Q96S06	567 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	TCF12	Q99081	682 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	SLX1A	Q9BQ83	275 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	LZTFL1	Q9NQ48	299 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	FAM114A2	Q9NRY5	505 aa		10.01	□□□□□ -0.81
LSM4-205	ENST00000597776	OLAH	Q9NV23	265 aa		10.01	□□□□□ -0.81

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