RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 IL1RAPL1Q9NZN1 696 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 CRYL1Q9Y2S2 319 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 KLK4Q9Y5K2 254 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 HS3ST3B1Q9Y662 390 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 MAU2Q9Y6X3 613 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 NOTCH2Q04721 2471 aa14.49□□□□□ -0.09
TGFB1-202ENST00000597453 LOC105369274A0A096LPK9 316 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 LOC102723532A0A0G2JNH3 316 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 A0A0J9YVX5 310 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 TP73O15350 636 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 MATN4O95460 622 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 PIM1P11309 404 aaPredicted RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ITGA3P26006 1051 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 CCNFP41002 786 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 DHX9Q08211 1270 aaKnown RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ACSBG2Q5FVE4 666 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 KIRREL2Q6UWL6 708 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 RNF44Q7L0R7 432 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 LMNTD2Q8IXW0 634 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 OR4N4Q8N0Y3 316 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 PDIK1LQ8N165 341 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 RAB42Q8N4Z0 105 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 SSC4DQ8WTU2 575 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ZNF592Q92610 1267 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 FOPNLQ96NB1 174 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ERP44Q9BS26 406 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ACAT2Q9BWD1 397 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 ILKAPQ9H0C8 392 aaPredicted RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 SYNPO2LQ9H987 977 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 SPATA7Q9P0W8 599 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 STOX2Q9P2F5 926 aaPredicted RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 PLEKHB1Q9UF11 243 aaPredicted RBP14.48□□□□□ -0.09
TGFB1-202ENST00000597453 CSAG2Q9Y5P2 127 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 MRFAP1Q9Y605 127 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 FAM169AQ9Y6X4 670 aa14.48□□□□□ -0.09
TGFB1-202ENST00000597453 HYKKA2RU49 373 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 OR2A25A4D2G3 310 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ARHGEF33A8MVX0 844 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 PFDN6O15212 129 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 SRPX2O60687 465 aaPredicted RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 IPO13O94829 963 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 TTC4O95801 387 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ESR1P03372 595 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ERGP11308 486 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 VARSP26640 1264 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ATP5DP30049 168 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ADARP55265 1226 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ARL4CP56559 192 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 MRPS25P82663 173 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 AIMP2Q13155 320 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 CRYMQ14894 314 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 NR6A1Q15406 480 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 HIF1AQ16665 826 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 LONRF1Q17RB8 773 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 BBS9Q3SYG4 887 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 MSS51Q4VC12 460 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 CRB2Q5IJ48 1285 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 PRAMEF13Q5VWM6 474 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 DUPD1Q68J44 220 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 NEPROQ6NW34 567 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 Q6ZS92 163 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 CENPUQ71F23 418 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 CUZD1Q86UP6 607 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 CILP2Q8IUL8 1156 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ZADH2Q8N4Q0 377 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 PRR7Q8TB68 274 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 NACC2Q96BF6 587 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 LRRC39Q96DD0 335 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 C10orf90Q96M02 699 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 INTS10Q9NVR2 710 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 WHRNQ9P202 907 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 ZC3H7BQ9UGR2 993 aaKnown RBP14.47□□□□□ -0.09
TGFB1-202ENST00000597453 VPS9D1Q9Y2B5 631 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 NTNG1Q9Y2I2 539 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 SNX24Q9Y343 169 aa14.47□□□□□ -0.09
TGFB1-202ENST00000597453 POLEQ07864 2286 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 VSTM2BA6NLU5 285 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 H3BMM5 538 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 KLHL41O60662 606 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 BANF1O75531 89 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 CBX6O95503 412 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 EIF2S1P05198 315 aaKnown RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 PKMP14618 531 aaKnown RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 CHRM3P20309 590 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 CALCOCO2Q13137 446 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 THOC5Q13769 683 aaKnown RBP14.46□□□□□ -0.09
TGFB1-202ENST00000597453 RBBP7Q16576 425 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 KLHL38Q2WGJ6 581 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 FAM214AQ32MH5 1076 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 C4orf17Q53FE4 359 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 SPANXN3Q5MJ09 141 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 ZNF470Q6ECI4 717 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 FBXO42Q6P3S6 717 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 SUSD1Q6UWL2 747 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 PARP9Q8IXQ6 854 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 OR11G2Q8NGC1 345 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 OR9A1PQ8NGU1 263 aa14.46□□□□□ -0.09
TGFB1-202ENST00000597453 GIMAP7Q8NHV1 300 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms