RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 TIAL1Q01085 375 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 GARNL3Q5VVW2 1013 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 JMJD6Q6NYC1 403 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 IGFL3Q6UXB1 125 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 CLEC18BQ6UXF7 455 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 UBE2R2Q712K3 238 aaPredicted RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 TMEM151BQ8IW70 566 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 RBMXL3Q8N7X1 1067 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 CLEC18CQ8NCF0 446 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 PNPLA2Q96AD5 504 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 LRRC39Q96DD0 335 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 OR2A5Q96R48 311 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 TAS2R13Q9NYV9 303 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 TRMT6Q9UJA5 497 aaKnown RBP17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 CDC14AQ9UNH5 594 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 NUP210LQ5VU65 1888 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 SETXQ7Z333 2677 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 IGLV3-12A0A075B6K2 115 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 TXNDC9O14530 226 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 SOCS6O14544 535 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 SLC16A5O15375 505 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 IPO13O94829 963 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 MED26O95402 600 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 SYF2O95926 243 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 ALPPP05187 535 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 EIF2S1P05198 315 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 C8GP07360 202 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 HRH2P25021 359 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 GABRB3P28472 473 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 IMPA1P29218 277 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 RGS4P49798 205 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 GNG11P61952 73 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 DR1Q01658 176 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 AIMP2Q13155 320 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 IGDCC3Q8IVU1 814 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 PDIK1LQ8N165 341 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CPT1CQ8TCG5 803 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 MCOLN3Q8TDD5 553 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CERS2Q96G23 380 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 VPS50Q96JG6 964 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 C10orf90Q96M02 699 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 ZNF552Q9H707 407 aaPredicted RBP17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CTSFQ9UBX1 484 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
CHMP2A-203ENST00000597209 CCDC188H7C350 402 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 PRPF4O43172 522 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 BANF1O75531 89 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 AHSGP02765 367 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 OCA2Q04671 838 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 SP140Q13342 867 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 TSTA3Q13630 321 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 UBAP2LQ14157 1087 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 SLC6A19Q695T7 634 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 HIBCHQ6NVY1 386 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 KIRREL2Q6UWL6 708 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 CSNK1A1LQ8N752 337 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 GALNT11Q8NCW6 608 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 EEF1AKMT1Q8WVE0 214 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 COL26A1Q96A83 441 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 CABS1Q96KC9 395 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 NDNQ99608 321 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 PCBD2Q9H0N5 130 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 SOX17Q9H6I2 414 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 TMEM184CQ9NVA4 438 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 RNF14Q9UBS8 474 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 ZNF282Q9UDV7 671 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 CORO1CQ9ULV4 474 aaPredicted RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 RUVBL1Q9Y265 456 aaKnown RBP17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 HS3ST3B1Q9Y662 390 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 MAU2Q9Y6X3 613 aa17.09■□□□□ 0.33
CHMP2A-203ENST00000597209 HEATR5BQ9P2D3 2071 aa17.08■□□□□ 0.33
CHMP2A-203ENST00000597209 ELK3P41970 407 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 CBLBQ13191 982 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 FRG1Q14331 258 aaKnown RBP17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 PRAMEF13Q5VWM6 474 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 STEAP4Q687X5 459 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 PAQR3Q6TCH7 311 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 SPNS2Q8IVW8 549 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 KLHL7Q8IXQ5 586 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 PALM2Q8IXS6 379 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 MYO1HQ8N1T3 1032 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms