RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SP140Q13342 867 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 SLC9A5Q14940 896 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 NKG7Q16617 165 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PRTGQ2VWP7 1150 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 COX15Q7KZN9 410 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 MRGPREQ86SM8 312 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PALM2Q8IXS6 379 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 BBOF1Q8ND07 529 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 SPATA4Q8NEY3 305 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PDLIM5Q96HC4 596 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 OR2A5Q96R48 311 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 KRT12Q99456 494 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 NDNQ99608 321 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 WDR83Q9BRX9 315 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PCBD2Q9H0N5 130 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 EPN3Q9H201 632 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 MOCS1Q9NZB8 636 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 NXT1Q9UKK6 140 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PDE10AQ9Y233 779 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 VWA7Q9Y334 891 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 KCNE1BA0A087WTH5 132 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 PYCARD-AS1I3L0S3 204 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 NRP2O60462 931 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 KLHL41O60662 606 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TSPAN12O95859 305 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 EIF2S1P05198 315 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 MMP11P24347 488 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 RPL21P46778 160 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ETF1P62495 437 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 FOXK1P85037 733 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ILF2Q12905 390 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TSTA3Q13630 321 aaPredicted RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 DCAF10Q5QP82 559 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 HP1BP3Q5SSJ5 553 aaPredicted RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 RBM20Q5T481 1227 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 HECTD2Q5U5R9 776 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 GARNL3Q5VVW2 1013 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TRMT10BQ6PF06 316 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 MAATS1Q7Z4T9 603 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 PPP1R32Q7Z5V6 425 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 MYO1HQ8N1T3 1032 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 CLEC1AQ8NC01 280 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 PPFIBP2Q8ND30 876 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 FDCSPQ8NFU4 85 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 MVB12AQ96EY5 273 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 CFAP36Q96G28 342 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 SPSB2Q99619 263 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 SMAD5Q99717 465 aaKnown RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ERP44Q9BS26 406 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TRIM31Q9BZY9 425 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TRIM4Q9C037 500 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ZNF304Q9HCX3 659 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 TMEM184CQ9NVA4 438 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 P4HTMQ9NXG6 502 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 C5AR2Q9P296 337 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 STOX2Q9P2F5 926 aaPredicted RBP10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ADAMTS6Q9UKP5 1117 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 CDC14AQ9UNH5 594 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 CHMP2BQ9UQN3 213 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 SNX24Q9Y343 169 aa10.04□□□□□ -0.8
CCDC9-203ENST00000596938 ASH1LQ9NR48 2969 aaKnown RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 A6NL46 340 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 H7BY64 318 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 AGPSO00116 658 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 MED26O95402 600 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 HIST1H2AGP0C0S8 130 aaPredicted RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 HIST1H2ADP20671 130 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 FDXRP22570 491 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 CCND1P24385 295 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 OR1D4P47884 311 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 MGAT5Q09328 741 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 PDIA2Q13087 525 aaKnown RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 MYBPC3Q14896 1274 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 THEMIS2Q5TEJ8 643 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 FAM45BPQ6NSW5 357 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 AGTRAPQ6RW13 159 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 CYS1Q717R9 158 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 ANKMY2Q8IV38 441 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 ARHGEF39Q8N4T4 335 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 CSNK1A1LQ8N752 337 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 FBXO36Q8NEA4 188 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 FAM45AQ8TCE6 357 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 ANKRD7Q92527 254 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 RERGQ96A58 199 aaPredicted RBP10.03□□□□□ -0.8
CCDC9-203ENST00000596938 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 LINGO1Q96FE5 620 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 HIST1H2AHQ96KK5 128 aa10.03□□□□□ -0.8
CCDC9-203ENST00000596938 C10orf90Q96M02 699 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms