RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SLX1AQ9BQ83 275 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 P2RY12Q9H244 342 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 MRPS30Q9NP92 439 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 ENAMQ9NRM1 1142 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 BFARQ9NZS9 450 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 SPATA7Q9P0W8 599 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 TRPC4Q9UBN4 977 aa10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 MRPS2Q9Y399 296 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-202ENST00000596708 OR2A25A4D2G3 310 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 IDSB3KWA1 339 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 PFDN6O15212 129 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 VPS26AO75436 327 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 SERPINA7P05543 415 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 ANXA5P08758 320 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 ZSCAN5DPP0CG00 497 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 COX6A1P12074 109 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 PRF1P14222 555 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 CHRM3P20309 590 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 FDXRP22570 491 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 RPA3P35244 121 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 NPY2RP49146 381 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 TNFSF10P50591 281 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 BASP1P80723 227 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 ANKRD20A4Q4UJ75 823 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 CTSL3PQ5NE16 218 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 GFRALQ6UXV0 394 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 SDCCAG8Q86SQ7 713 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 SLC13A5Q86YT5 568 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 MPP5Q8N3R9 675 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 OR9A1PQ8NGU1 263 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 PSMF1Q92530 271 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 NR4A3Q92570 626 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 HAS2Q92819 552 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 FAM136AQ96C01 138 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 C10orf90Q96M02 699 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 DESI2Q9BSY9 194 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 UNKQ9C0B0 810 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 TREX1Q9NSU2 369 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 ABCF3Q9NUQ8 709 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 UTP6Q9NYH9 597 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 SUCOQ9UBS9 1254 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 RUVBL1Q9Y265 456 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 KLK4Q9Y5K2 254 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 CAPN6Q9Y6Q1 641 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 NCOA6Q14686 2063 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 CENPEQ02224 2701 aa10.05□□□□□ -0.8
CHMP2A-202ENST00000596708 IGLV3-12A0A075B6K2 115 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 IGHV1-45A0A0A0MS14 117 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 TRGV8A0A0C4DH27 118 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 GOLGA8KD6RF30 607 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 GOLGA8TH3BQL2 631 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 AP3B1O00203 1094 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 PCDH17O14917 1159 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 NIPSNAP2O75323 286 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 VAPBO95292 243 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 BMP10O95393 424 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 CELA2AP08217 269 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 RPL22P35268 128 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 SOX11P35716 441 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 TDGF1P3P51864 188 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 EMP3P54852 163 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 SRSF11Q05519 484 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 HKDC1Q2TB90 917 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 PRTGQ2VWP7 1150 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 ZNF324BQ6AW86 544 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 MRNIPQ6NTE8 343 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 LRRC8BQ6P9F7 803 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 CES3Q6UWW8 571 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 MCEMP1Q8IX19 187 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 CSNK1A1LQ8N752 337 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 SUN3Q8TAQ9 357 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 SMPDL3AQ92484 453 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 RELTQ969Z4 430 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 RERGQ96A58 199 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 MFSD3Q96ES6 412 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 MVB12AQ96EY5 273 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 BIRC8Q96P09 236 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 TAAR6Q96RI8 345 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 TRIM56Q9BRZ2 755 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 IL22Q9GZX6 179 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 C14orf105Q9NVL8 296 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 RIC8BQ9NVN3 520 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 DRG1Q9Y295 367 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 CRYL1Q9Y2S2 319 aa10.04□□□□□ -0.8
CHMP2A-202ENST00000596708 A0A0A6YYC8 382 aaPredicted RBP10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 ZNF839A8K0R7 811 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 E5RI56 91 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 H3BMM5 538 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 I3L1I5 382 aaPredicted RBP10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 CCL21O00585 134 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 TXNDC9O14530 226 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 PHF2O75151 1096 aa10.03□□□□□ -0.8
CHMP2A-202ENST00000596708 UNC5CO95185 931 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms