RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SPRY4Q9C004 299 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 DERL2Q9GZP9 239 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 TWSG1Q9GZX9 223 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 VPS11Q9H270 941 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 AKIRIN1Q9H9L7 192 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 GPN2Q9H9Y4 310 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 EURLQ9NYK6 297 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 NDOR1Q9UHB4 597 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 PADI1Q9ULC6 663 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 RNF112Q9ULX5 631 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 ACOT9Q9Y305 439 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 OARD1Q9Y530 152 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 PIEZO2Q9H5I5 2752 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TARM1B6A8C7 271 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 CTSVO60911 334 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 FKBP9O95302 570 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 WISP3O95389 354 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 STATHP02808 62 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 MT-ND3P03897 115 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 S100BP04271 92 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 C2P06681 752 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 KLK3P07288 261 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 LTA4HP09960 611 aaKnown RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 SLC35E2BP0CK96 405 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 CDH1P12830 882 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TFEBP19484 476 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TCN2P20062 427 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 ALAS2P22557 587 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 GLRBP48167 497 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SERPINB8P50452 374 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SERPINB9P50453 376 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 AP1S2P56377 157 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 ATP6V0D1P61421 351 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 RHDQ02161 417 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 DLG1Q12959 904 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 GPS2Q13227 327 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 OR4D1Q15615 310 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 ZKSCAN8Q15776 578 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 TAF1BQ53T94 588 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 FBXO48Q5FWF7 155 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 FRMPD2BQ6IN97 320 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TAOK1Q7L7X3 1001 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 ADAMTSL2Q86TH1 951 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 C17orf64Q86WR6 236 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 GPSM1Q86YR5 675 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 PLD3Q8IV08 490 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TTC29Q8NA56 475 aaPredicted RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SLC38A9Q8NBW4 561 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 DCAKDQ8WVC6 231 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 KCTD4Q8WVF5 259 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SNRNP27Q8WVK2 155 aaKnown RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 ATL1Q8WXF7 558 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 FBXL8Q96CD0 374 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 PLCD4Q9BRC7 762 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 FUT8Q9BYC5 575 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 ALG9Q9H6U8 611 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 NMRAL1Q9HBL8 299 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 LHX9Q9NQ69 397 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SNX15Q9NRS6 342 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 TXLNGQ9NUQ3 528 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 CD274Q9NZQ7 290 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 CROTQ9UKG9 612 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SNX7Q9UNH6 387 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 SH2B3Q9UQQ2 575 aa10.63□□□□□ -0.71
LIG1-211ENST00000596457 MRPS18BQ9Y676 258 aaKnown RBP10.63□□□□□ -0.71
LIG1-211ENST00000596457 A0A087X1B8 175 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 A0A096LPK6 155 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 LOC105369274A0A096LPK9 316 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 IGKV1-8A0A0C4DH67 115 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 LOC102723532A0A0G2JNH3 316 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 FEZF1A0PJY2 475 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 HMX2A2RU54 273 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 SUPT3HB4E1H0 165 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 TRIM49D1C9J1S8 452 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 HAT1O14929 419 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ATXN7O15265 892 aaPredicted RBP10.62□□□□□ -0.71
LIG1-211ENST00000596457 EFSO43281 561 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 SUPT3HO75486 399 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 KRT38O76015 456 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 WDR47O94967 919 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PLA2G2AP14555 144 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 CCND1P24385 295 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 STAT5AP42229 794 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 VSNL1P62760 191 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ABATP80404 500 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 MEF2AQ02078 507 aaPredicted RBP10.62□□□□□ -0.71
LIG1-211ENST00000596457 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ABHD18Q0P651 414 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 MAP7Q14244 749 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 SLC9A5Q14940 896 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 NAA25Q14CX7 972 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PPP1R3AQ16821 1122 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ERCC6LQ2NKX8 1250 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PTCHD3Q3KNS1 767 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 WASHC2DQ5SRD0 308 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 LCN10Q6JVE6 187 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms