RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 C19orf47Q8N9M1 422 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 AGBL5Q8NDL9 886 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 ZNF740Q8NDX6 193 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 OR6Y1Q8NGX8 325 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 WDR36Q8NI36 951 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 ATL1Q8WXF7 558 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 ZUFSPQ96AP4 578 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 TCTN2Q96GX1 697 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 PRAP1Q96NZ9 151 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 OR2A5Q96R48 311 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 SH3GL2Q99962 352 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 DPH7Q9BTV6 452 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 SARGQ9BW04 601 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 C1QTNF3Q9BXJ4 246 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 MRPL46Q9H2W6 279 aaKnown RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 POLR1BQ9H9Y6 1135 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 CCDC177Q9NQR7 707 aaPredicted RBP10.15□□□□□ -0.78
LIG1-210ENST00000596332 CD274Q9NZQ7 290 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 SLC17A7Q9P2U7 560 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 ZNF225Q9UK10 706 aa10.15□□□□□ -0.78
LIG1-210ENST00000596332 EFCAB7A8K855 629 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 TMX2-CTNND1H3BSU7 103 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 E2F3O00716 465 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 HAT1O14929 419 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 SPAG7O75391 227 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 STK16O75716 305 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 RASSF9O75901 435 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 WFS1O76024 890 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 RPS17P08708 135 aaKnown RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 FGF5P12034 268 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 ZNF28P17035 718 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 RPA3P35244 121 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 CASP2P42575 452 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 ABATP80404 500 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 NFKB2Q00653 900 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 COL9A2Q14055 689 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 UNC50Q53HI1 259 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 C3orf38Q5JPI3 329 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 PRAMEF13Q5VWM6 474 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 CAPN13Q6MZZ7 669 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 ARMC6Q6NXE6 501 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 RNF44Q7L0R7 432 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 VN1R4Q7Z5H5 301 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 PLD3Q8IV08 490 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 SHISA5Q8N114 240 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 CNPY4Q8N129 248 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 FBXO39Q8N4B4 442 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 PTGR2Q8N8N7 351 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 SLC38A9Q8NBW4 561 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 OR1L3Q8NH93 324 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 USP7Q93009 1102 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 EXT2Q93063 718 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 TM4SF19Q96DZ7 209 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 WDR34Q96EX3 536 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 MED8Q96G25 268 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 NSUN5Q96P11 429 aaKnown RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 CTRCQ99895 268 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 EGFL8Q99944 293 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 AICDAQ9GZX7 198 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 SPRTNQ9H040 489 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 VIPAS39Q9H9C1 493 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 MRPS30Q9NP92 439 aaKnown RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 TMEM184CQ9NVA4 438 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 FOXJ2Q9P0K8 574 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 COPG2Q9UBF2 871 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 ZNF490Q9ULM2 529 aaPredicted RBP10.14□□□□□ -0.79
LIG1-210ENST00000596332 PCDHGA3Q9Y5H0 932 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 B3GALT1Q9Y5Z6 326 aa10.14□□□□□ -0.79
LIG1-210ENST00000596332 ANKRD12Q6UB98 2062 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 KCNE1BA0A087WTH5 132 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 UQCRHLA0A096LP55 91 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ZNF839A8K0R7 811 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 SUPT3HB4E1H0 165 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 E7EQ34 232 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 TAF4O00268 1085 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 OR7A17O14581 309 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 STX16O14662 325 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 GLRA3O75311 464 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 SUPT3HO75486 399 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 UQCRHP07919 91 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 DHRS4L1P0CG22 281 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 CDH1P12830 882 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 CCND1P24385 295 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 VARSP26640 1264 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 CMPK1P30085 196 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ARRB2P32121 409 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 CSTF2P33240 577 aaKnown RBP eCLIP10.13□□□□□ -0.79
LIG1-210ENST00000596332 MEF2AQ02078 507 aaPredicted RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 EIF3IQ13347 325 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 PCLAFQ15004 111 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 DEFB110Q30KQ9 67 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 TTMPQ5BVD1 217 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ADNP2Q6IQ32 1131 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 PWWP2BQ6NUJ5 590 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 NXPE4Q6UWF7 544 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ZYG11AQ6WRX3 759 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 FRA10AC1Q70Z53 315 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms