RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 ANKRD7Q92527 254 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 NACC2Q96BF6 587 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 IP6K3Q96PC2 410 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 OLFM1Q99784 485 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 TRIM55Q9BYV6 548 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 DPH5Q9H2P9 285 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 IRAK4Q9NWZ3 460 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 NSMCE4AQ9NXX6 385 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 UTP6Q9NYH9 597 aaKnown RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 STOX2Q9P2F5 926 aaPredicted RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 IFT80Q9P2H3 777 aaPredicted RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 TAC3Q9UHF0 121 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 PCDHGA9Q9Y5G4 932 aaKnown RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 PCSK5Q92824 1860 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 A0A0J9YVX5 310 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 HYKKA2RU49 373 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 H0YGG7 62 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 MED26O95402 600 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 SYF2O95926 243 aaKnown RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 PIM1P11309 404 aaPredicted RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 EZRP15311 586 aaKnown RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 ALAS2P22557 587 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 ARF3P61204 181 aaPredicted RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 CAV1Q03135 178 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 PHKG1Q16816 387 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 LACTB2Q53H82 288 aaPredicted RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 TMEM207Q6UWW9 146 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 MED25Q71SY5 747 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 RAB43Q86YS6 212 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 GPATCH11Q8N954 259 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 TMEM102Q8N9M5 508 aaPredicted RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 PYROXD1Q8WU10 500 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 PTERQ96BW5 349 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 SGPP1Q9BX95 441 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 PCBD2Q9H0N5 130 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 ING2Q9H160 280 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 WDR54Q9H977 334 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 SMYD2Q9NRG4 433 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 TMEM184CQ9NVA4 438 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 NDOR1Q9UHB4 597 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 GPN3Q9UHW5 284 aaPredicted RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 CDC23Q9UJX2 597 aa12.47□□□□□ -0.41
USE1-207ENST00000596136 UTP11Q9Y3A2 253 aaKnown RBP12.47□□□□□ -0.41
USE1-207ENST00000596136 TENM4Q6N022 2769 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 KCNE1BA0A087WTH5 132 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 ARGFXA6NJG6 315 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 VSTM2BA6NLU5 285 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 J3QKU1 62 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 K7EM74 188 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 C1QAP02745 245 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 UMODP07911 640 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 GSTA2P09210 222 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 CCND1P24385 295 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 FOLR3P41439 243 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 PGGT1BP53609 377 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 AP1S2P56377 157 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 TBPL1P62380 186 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 NKG7Q16617 165 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 GARNL3Q5VVW2 1013 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 CPZQ66K79 652 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 PRMT9Q6P2P2 845 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 C10orf90Q96M02 699 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 RAB17Q9H0T7 212 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 SAYSD1Q9NPB0 183 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 CCDC177Q9NQR7 707 aaPredicted RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 ZNF71Q9NQZ8 489 aaPredicted RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 CUEDC1Q9NWM3 386 aaPredicted RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 ANAPC2Q9UJX6 822 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 NOVA2Q9UNW9 492 aaKnown RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 TP53TG5Q9Y2B4 290 aa12.46□□□□□ -0.41
USE1-207ENST00000596136 PTRH2Q9Y3E5 179 aaKnown RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
USE1-207ENST00000596136 IGLV3-12A0A075B6K2 115 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 FAM95CA0A1B0GW59 222 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SLC28A2O43868 658 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 DNAJB5O75953 348 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 WISP3O95389 354 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 ENO2P09104 434 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 HIST1H2AGP0C0S8 130 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 NPPBP16860 134 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 ZNF37AP17032 561 aaPredicted RBP12.45□□□□□ -0.42
USE1-207ENST00000596136 HIST1H2ADP20671 130 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SSTR1P30872 391 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 RRADP55042 308 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 PLTPP55058 493 aa12.45□□□□□ -0.42
USE1-207ENST00000596136 SOX8P57073 446 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms