RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 KIAA2013Q8IYS2 634 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 ANKK1Q8NFD2 765 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 ZFP90Q8TF47 636 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 CRNNQ9UBG3 495 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SPTBN5Q9NRC6 3674 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 A8MU76 341 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 DYRK3O43781 588 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 CBSLP0DN79 551 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 HLA-EP13747 358 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 CBSP35520 551 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 SERPINB10P48595 397 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 KCNK10P57789 538 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 CHRNEQ04844 493 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 SLCO6A1Q86UG4 719 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 FAM110BQ8TC76 370 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 WRAP53Q9BUR4 548 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 MARCH7Q9H992 704 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 FARSBQ9NSD9 589 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 ACTR3BQ9P1U1 418 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 ZNF639Q9UID6 485 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 PDE10AQ9Y233 779 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 DGKBQ9Y6T7 804 aa16.58■□□□□ 0.24
SHKBP1-205ENST00000594973 FAM149AA5PLN7 773 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 PRRT4C9JH25 899 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 STK16O75716 305 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ANXA5P08758 320 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 HSD17B1P14061 328 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ENDOUP21128 410 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 PHC1P78364 1004 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 PIWIL3Q7Z3Z3 882 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ADGRG5Q8IZF4 528 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 RDH14Q9HBH5 336 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ABCD2Q9UBJ2 740 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ZNF229Q9UJW7 825 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 FADS2P1A8MWK0 482 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ELFN1P0C7U0 828 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 EPB42P16452 691 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 MSH3P20585 1137 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 RCAN2Q14206 197 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 SFTPA1Q8IWL2 248 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 SPARTQ8N0X7 666 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 NUDT8Q8WV74 236 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 ELMO1Q92556 727 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 BRINP2Q9C0B6 783 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 OR2B2Q9GZK3 357 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 NEK6Q9HC98 313 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 SLC52A3Q9NQ40 469 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 PCDHGA11Q9Y5H2 935 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 PLXNB3Q9ULL4 1909 aa16.57■□□□□ 0.24
SHKBP1-205ENST00000594973 CCDC154A6NI56 674 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 LOC730098B7Z3J9 87 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 ALBP02768 609 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 CXCR2P25025 360 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 POLR2JP52435 117 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 GABARAPL2P60520 117 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 SELPLGQ14242 412 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 ACOX1Q15067 660 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PLCL1Q15111 1095 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 DGUOKQ16854 277 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 AP5B1Q2VPB7 878 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 SIGIRRQ6IA17 410 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PARS2Q7L3T8 475 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 NPAS3Q8IXF0 933 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 OR6Q1Q8NGQ2 317 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 MUL1Q969V5 352 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PYCR2Q96C36 320 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 MUC13Q9H3R2 512 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 WARS2Q9UGM6 360 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 A0A1W2PP18 115 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 ASPDHA6ND91 283 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 FXYD1O00168 92 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 NME4O00746 187 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 HOXC11O43248 304 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 SNAP29O95721 258 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 GSNP06396 782 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 SRPRAP08240 638 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 G6PDP11413 515 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 BMP4P12644 408 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 CRHBPP24387 322 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 IL12AP29459 219 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 HMGCS1Q01581 520 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 CTF1Q16619 201 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 AAK1Q2M2I8 961 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 ZNF284Q2VY69 593 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 RFTN2Q52LD8 501 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 FNDC3BQ53EP0 1204 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 HENMT1Q5T8I9 393 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PRR23CQ6ZRP0 262 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PAPD5Q8NDF8 572 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 DNAJB14Q8TBM8 379 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 PROKR1Q8TCW9 393 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 HDAC2Q92769 488 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 LRRC58Q96CX6 371 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 MTFMTQ96DP5 389 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 HPS4Q9NQG7 708 aa16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 POLR3HQ9Y535 204 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-205ENST00000594973 TSPAN11A1L157 253 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms