RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 EPN3Q9H201 632 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 WDR54Q9H977 334 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 PARVBQ9HBI1 364 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 SLC22A11Q9NSA0 550 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 SLC17A6Q9P2U8 582 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 SNX24Q9Y343 169 aa14.6□□□□□ -0.07
TRIM28-203ENST00000593582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIM28-203ENST00000593582 IGKV1-8A0A0C4DH67 115 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 H0YGG7 62 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 TP73O15350 636 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 SLC16A5O15375 505 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CNOT3O75175 753 aaKnown RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CEACAM4O75871 244 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ONECUT2O95948 504 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 IMPA1P29218 277 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CASQ1P31415 396 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 RPL21P46778 160 aaKnown RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 IL2P60568 153 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ARF3P61204 181 aaPredicted RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ZNF425Q6IV72 752 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 PRMT9Q6P2P2 845 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ADCK2Q7Z695 626 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 PAQR7Q86WK9 346 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 METTL27Q8N6F8 245 aaPredicted RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CLEC1AQ8NC01 280 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 RERGQ96A58 199 aaPredicted RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 NACC2Q96BF6 587 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 LINGO1Q96FE5 620 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CLMPQ9H6B4 373 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 CCDC177Q9NQR7 707 aaPredicted RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ZFATQ9P243 1243 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 NXT1Q9UKK6 140 aaKnown RBP14.59□□□□□ -0.07
TRIM28-203ENST00000593582 ADAMTS6Q9UKP5 1117 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 VWA7Q9Y334 891 aa14.59□□□□□ -0.07
TRIM28-203ENST00000593582 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 FAM187AA6NFU0 413 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 A6NL46 340 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 PDGFAP04085 211 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 UMODP07911 640 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 HIST1H2AGP0C0S8 130 aaPredicted RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 HIST1H2ADP20671 130 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 OR1D4P47884 311 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 ETF1P62495 437 aaKnown RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 RELAQ04206 551 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 MGAT5Q09328 741 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 CALCOCO2Q13137 446 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 NKG7Q16617 165 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 HECTD2Q5U5R9 776 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 FAM45BPQ6NSW5 357 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 LRRC56Q8IYG6 542 aaPredicted RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 CSNK1A1LQ8N752 337 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 FBXO36Q8NEA4 188 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 FDCSPQ8NFU4 85 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 FAM45AQ8TCE6 357 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 COL26A1Q96A83 441 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 HIST1H2AHQ96KK5 128 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 HIST1H2AJQ99878 128 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 ERP44Q9BS26 406 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 H2AFJQ9BTM1 129 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 PCBD2Q9H0N5 130 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 SLC26A1Q9H2B4 701 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 ZNF304Q9HCX3 659 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 P4HTMQ9NXG6 502 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 GPR83Q9NYM4 423 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 STOX2Q9P2F5 926 aaPredicted RBP14.58□□□□□ -0.08
TRIM28-203ENST00000593582 PDE10AQ9Y233 779 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 PCDHGB7Q9Y5F8 929 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 MAU2Q9Y6X3 613 aa14.58□□□□□ -0.08
TRIM28-203ENST00000593582 E7ESA3 106 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 H7BY64 318 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 TXNDC9O14530 226 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 ZIC2O95409 532 aaPredicted RBP14.57□□□□□ -0.08
TRIM28-203ENST00000593582 FDXRP22570 491 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 HRH2P25021 359 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 EMP3P54852 163 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 FOXL2P58012 376 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 TBPL1P62380 186 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 MRPS25P82663 173 aaKnown RBP14.57□□□□□ -0.08
TRIM28-203ENST00000593582 FASTKD3Q14CZ7 662 aaKnown RBP14.57□□□□□ -0.08
TRIM28-203ENST00000593582 PRTGQ2VWP7 1150 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 COLEC12Q5KU26 742 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 DCAF10Q5QP82 559 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 PRAMEF13Q5VWM6 474 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 COX15Q7KZN9 410 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 PPP1R32Q7Z5V6 425 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 C17orf53Q8N3J3 647 aaPredicted RBP14.57□□□□□ -0.08
TRIM28-203ENST00000593582 PRAP1Q96NZ9 151 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 OR2A5Q96R48 311 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 WHRNQ9P202 907 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 CTSFQ9UBX1 484 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms