RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 KCNMB4Q86W47 210 aa19.51■□□□□ 0.71
TRIM47-207ENST00000593089 ST6GALNAC3Q8NDV1 305 aa19.51■□□□□ 0.71
TRIM47-207ENST00000593089 GRHL3Q8TE85 626 aa19.51■□□□□ 0.71
TRIM47-207ENST00000593089 SMPDL3AQ92484 453 aa19.51■□□□□ 0.71
TRIM47-207ENST00000593089 TRIM56Q9BRZ2 755 aaKnown RBP19.51■□□□□ 0.71
TRIM47-207ENST00000593089 YIPF2Q9BWQ6 316 aa19.51■□□□□ 0.71
TRIM47-207ENST00000593089 UNC79Q9P2D8 2635 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 VPS26AO75436 327 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 PSIP1O75475 530 aaKnown RBP19.5■□□□□ 0.71
TRIM47-207ENST00000593089 KLHL18O94889 574 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 F7P08709 466 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-207ENST00000593089 ERGP11308 486 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 CXCR5P32302 372 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 ADARP55265 1226 aaKnown RBP19.5■□□□□ 0.71
TRIM47-207ENST00000593089 KCNJ11Q14654 390 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 PRTGQ2VWP7 1150 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 CENPUQ71F23 418 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 LAPTM4BQ86VI4 370 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 PPFIBP2Q8ND30 876 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 COG1Q8WTW3 980 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 PKP4Q99569 1192 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 PLCD4Q9BRC7 762 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 SYNPO2LQ9H987 977 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 FAM114A2Q9NRY5 505 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 ABCF3Q9NUQ8 709 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 TAC3Q9UHF0 121 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 RUVBL1Q9Y265 456 aaKnown RBP19.5■□□□□ 0.71
TRIM47-207ENST00000593089 TEX15Q9BXT5 2789 aa19.5■□□□□ 0.71
TRIM47-207ENST00000593089 MYO1CO00159 1063 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 CATP04040 527 aaKnown RBP19.49■□□□□ 0.71
TRIM47-207ENST00000593089 PAMP19021 973 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 SARNPP82979 210 aaKnown RBP19.49■□□□□ 0.71
TRIM47-207ENST00000593089 GPS1Q13098 491 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 MFAP5Q13361 173 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 TLR1Q15399 786 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 HKDC1Q2TB90 917 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 NEPROQ6NW34 567 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 PAQR7Q86WK9 346 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 CILP2Q8IUL8 1156 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 SPNS2Q8IVW8 549 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 CSNK1A1LQ8N752 337 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 CATSPER1Q8NEC5 780 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 SLC30A3Q99726 388 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 TRPC4Q9UBN4 977 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 CDC14AQ9UNH5 594 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 DOPEY1Q5JWR5 2465 aa19.49■□□□□ 0.71
TRIM47-207ENST00000593089 HEATR5BQ9P2D3 2071 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 IGLV3-12A0A075B6K2 115 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 NSG1A0A0A6YYJ2 146 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 IGKV1-8A0A0C4DH67 115 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 E2F3O00716 465 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 PHF2O75151 1096 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 USP1O94782 785 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 CCDC175P0C221 793 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 DCTP40126 519 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 PNLIPRP1P54315 467 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 EMP2P54851 167 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 EEF1A2Q05639 463 aaKnown RBP19.48■□□□□ 0.71
TRIM47-207ENST00000593089 ARHGAP19Q14CB8 494 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 ANKRD22Q5VYY1 191 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 ICE2Q659A1 982 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 ATG9BQ674R7 924 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 B3GNTL1Q67FW5 361 aaPredicted RBP19.48■□□□□ 0.71
TRIM47-207ENST00000593089 FAAH2Q6GMR7 532 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 REXO1L1PQ8IX06 675 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 KBTBD2Q8IY47 623 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 PRELID2Q8N945 189 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 FAR1Q8WVX9 515 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 ZNF669Q96BR6 464 aaPredicted RBP19.48■□□□□ 0.71
TRIM47-207ENST00000593089 MMABQ96EY8 250 aaPredicted RBP19.48■□□□□ 0.71
TRIM47-207ENST00000593089 HOMER3Q9NSC5 361 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 SAMD15Q9P1V8 674 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 OSGIN2Q9Y236 505 aa19.48■□□□□ 0.71
TRIM47-207ENST00000593089 CNTRLQ7Z7A1 2325 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 CTAGE9A4FU28 777 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 IDSB3KWA1 339 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 PRPF4O43172 522 aaKnown RBP eCLIP19.47■□□□□ 0.712e-12■■■■□ 21.7
TRIM47-207ENST00000593089 CCNDBP1O95273 360 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 SYF2O95926 243 aaKnown RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 COX6A1P12074 109 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 CXCR2P25025 360 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 CLCN7P51798 805 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 EMP3P54852 163 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 PRDX1Q06830 199 aaKnown RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 CUL1Q13616 776 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 DSG2Q14126 1118 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 DHX34Q14147 1143 aaKnown RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 ZNF470Q6ECI4 717 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 NDUFAF7Q7L592 441 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 ADCK2Q7Z695 626 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 CAND1Q86VP6 1230 aaKnown RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 TRIM58Q8NG06 486 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 RERGQ96A58 199 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 LMF1Q96S06 567 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 FBXO6Q9NRD1 293 aaPredicted RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 INTS10Q9NVR2 710 aaKnown RBP19.47■□□□□ 0.71
TRIM47-207ENST00000593089 PTGFRNQ9P2B2 879 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 PCYOX1Q9UHG3 505 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 VPS9D1Q9Y2B5 631 aa19.47■□□□□ 0.71
TRIM47-207ENST00000593089 NOTCH2Q04721 2471 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms