RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ERVPABLB-1P60509 514 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 HERVK_113P63132 956 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 GABREP78334 506 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 TLE1Q04724 770 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PRKAA1Q13131 559 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PRKG2Q13237 762 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 NR1D2Q14995 579 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PPP1R3AQ16821 1122 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PFKFB4Q16877 469 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ZNF678Q5SXM1 525 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 SPATA21Q7Z572 469 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 SPRED1Q7Z699 444 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 WDR75Q8IWA0 830 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 CACNA2D3Q8IZS8 1091 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 LSMEM2Q8N112 164 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 TCAIMQ8N3R3 496 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PTGR2Q8N8N7 351 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ANKS4BQ8N8V4 417 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 CCDC197Q8NCU1 140 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 OR10G6Q8NH81 332 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PIWIL2Q8TC59 973 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 MAGEC3Q8TD91 643 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PHF21BQ96EK2 531 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 AHCYL2Q96HN2 611 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 SEC16BQ96JE7 1060 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 TMEM237Q96Q45 408 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ELAC2Q9BQ52 826 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 SLC12A9Q9BXP2 914 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 KIR3DX1Q9H7L2 352 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 SYNDIG1Q9H7V2 258 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 PARVBQ9HBI1 364 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 HAO1Q9UJM8 370 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 IKZF3Q9UKT9 509 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 TDRKHQ9Y2W6 561 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 RAP2CQ9Y3L5 183 aa11.5□□□□□ -0.57
DDX39A-219ENST00000592927 ZFC3H1O60293 1989 aaKnown RBP11.5□□□□□ -0.57
DDX39A-219ENST00000592927 FLNCQ14315 2725 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 SLCO1B7G3V0H7 640 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 GFYI3L273 518 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 B4GAT1O43505 415 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 ITM2AO43736 263 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 PSIP1O75475 530 aaKnown RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 RPLP0P05388 317 aaKnown RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HIST1H2AGP0C0S8 130 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 AMD1P17707 334 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HIST1H2ADP20671 130 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 MAP4P27816 1152 aaKnown RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 BDKRB1P46663 353 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HNMTP50135 292 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 EPHA4P54764 986 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 AP1S2P56377 157 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 CCL7P80098 99 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 GPLD1P80108 840 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 SETDB1Q15047 1291 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 AMZ1Q400G9 498 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 CES4AQ5XG92 561 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 ANKS6Q68DC2 871 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 CCDC81Q6ZN84 652 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 UBE2R2Q712K3 238 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 RASGRP3Q8IV61 690 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HOMEZQ8IX15 550 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 CCNYL1Q8N7R7 359 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 OR52E1Q8NGJ3 308 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 WDR48Q8TAF3 677 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 MCOLN3Q8TDD5 553 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 LCN9Q8WX39 176 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 JPH3Q8WXH2 748 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 EXT2Q93063 718 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 RAD51AP1Q96B01 352 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HIST1H2AHQ96KK5 128 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 SORT1Q99523 831 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 HIST1H2AJQ99878 128 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 H2AFJQ9BTM1 129 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 TBC1D10AQ9BXI6 508 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 ZMYND15Q9H091 742 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 ILKAPQ9H0C8 392 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 LRRN3Q9H3W5 708 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 EPB41L1Q9H4G0 881 aa11.49□□□□□ -0.57
DDX39A-219ENST00000592927 ARID1BQ8NFD5 2236 aaPredicted RBP11.49□□□□□ -0.57
DDX39A-219ENST00000592927 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 DUX1O43812 170 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
DDX39A-219ENST00000592927 SUPT7LO94864 414 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 UBXN7O94888 489 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 RPS17P08708 135 aaKnown RBP11.48□□□□□ -0.57
DDX39A-219ENST00000592927 ANXA5P08758 320 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 TYRP1P17643 537 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 PCBP2Q15366 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
DDX39A-219ENST00000592927 UNC50Q53HI1 259 aa11.48□□□□□ -0.57
DDX39A-219ENST00000592927 ARL13AQ5H913 290 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms