RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CST1P01037 141 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 FTH1P02794 183 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 ELFN1P0C7U0 828 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 SLC2A4P14672 509 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 EPORP19235 508 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 SHMT2P34897 504 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 PBX2P40425 430 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 HSPA14Q0VDF9 509 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 ZXDCQ2QGD7 858 aaPredicted RBP13.85□□□□□ -0.19
RANBP3-229ENST00000592771 GTF2IRD2BQ6EKJ0 949 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 LRRC70Q7Z2Q7 622 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 CYP2U1Q7Z449 544 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 GTF2IRD2Q86UP8 949 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 EID3Q8N140 333 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 OR8D1Q8WZ84 308 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 SNX19Q92543 992 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 GLYATL1Q969I3 302 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 GDF15Q99988 308 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 SLC29A3Q9BZD2 475 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 TMEM245Q9H330 911 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 TOR3AQ9H497 397 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 CLMPQ9H6B4 373 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 ANGPTL3Q9Y5C1 460 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 LAMA3Q16787 3333 aa13.85□□□□□ -0.19
RANBP3-229ENST00000592771 KPNA3O00505 521 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 CXCR6O00574 342 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 RECQL5O94762 991 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 MT-ND1P03886 318 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 HNRNPCP07910 306 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 19.6
RANBP3-229ENST00000592771 EPB42P16452 691 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 MATN1P21941 496 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ELK4P28324 431 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 RYKP34925 604 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 POLR2IP36954 125 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 SLC6A12P48065 614 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 HNMTP50135 292 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 DGKQP52824 942 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 GRIN2CQ14957 1233 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 POM121L1PQ3SYA9 428 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 R3HCC1LQ7Z5L2 792 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 HIPK1Q86Z02 1210 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 MICU2Q8IYU8 434 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 SPARTQ8N0X7 666 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 GIPC3Q8TF64 312 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ZNF566Q969W8 418 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ARRDC3Q96B67 414 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 DTD2Q96FN9 168 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 THUMPD3Q9BV44 507 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 SLC32A1Q9H598 525 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 PIF1Q9H611 641 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 SOX17Q9H6I2 414 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ACTR8Q9H981 624 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 DCAF13Q9NV06 445 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ARL15Q9NXU5 204 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 LIMD1Q9UGP4 676 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ITM2BQ9Y287 266 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 NAALAD2Q9Y3Q0 740 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 WNT9AO14904 365 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 AREL1O15033 823 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 SLC16A6O15403 523 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 DFNA5O60443 496 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ULK1O75385 1050 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 RSL1D1O76021 490 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 CLPXO76031 633 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 PGRP06401 933 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 CCDC159P0C7I6 412 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ITIH1P19827 911 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 YAP1P46937 504 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 METAP1P53582 386 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 RAD23AP54725 363 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 AP1S2P56377 157 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 RPL38P63173 70 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ZIK1Q3SY52 487 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 DUS1LQ6P1R4 473 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ZNF765Q7L2R6 523 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 GET4Q7L5D6 327 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 CHDHQ8NE62 594 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 ELMO1Q92556 727 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 FIG4Q92562 907 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 USP7Q93009 1102 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 FAM162AQ96A26 154 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 AP2M1Q96CW1 435 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
RANBP3-229ENST00000592771 MAN2B2Q9Y2E5 1009 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 PCDHGB1Q9Y5G3 927 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 V9GYQ6 96 aa13.84□□□□□ -0.19
RANBP3-229ENST00000592771 TRANK1O15050 2925 aa13.83□□□□□ -0.2
RANBP3-229ENST00000592771 TRBV5-3A0A0A0MS03 114 aa13.83□□□□□ -0.2
RANBP3-229ENST00000592771 LOC730098B7Z3J9 87 aa13.83□□□□□ -0.2
RANBP3-229ENST00000592771 GNGT2O14610 69 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms