RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MC1RQ01726 317 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 UGT8Q16880 541 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 WASHC2DQ5SRD0 308 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 MRPL14Q6P1L8 145 aaKnown RBP17.43■□□□□ 0.38
DDX39A-212ENST00000590260 COX15Q7KZN9 410 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 SYVN1Q86TM6 617 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 PLD3Q8IV08 490 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 MCOLN3Q8TDD5 553 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 FBF1Q8TES7 1133 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 C10orf90Q96M02 699 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 CATSPER2Q96P56 530 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 OR2A5Q96R48 311 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 DPH2Q9BQC3 489 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-212ENST00000590260 SELENOSQ9BQE4 189 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 ANKMY1Q9P2S6 941 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 CCDC88CQ9P219 2028 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 PIEZO2Q9H5I5 2752 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 NPEPPSL1A6NEC2 478 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 H0YGG7 62 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 P2RX6O15547 441 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 SRPX2O60687 465 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 GSTA2P09210 222 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 ARF3P61204 181 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 RPS15P62841 145 aaKnown RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 PRTGQ2VWP7 1150 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 NKAIN1Q4KMZ8 207 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 TTLL10Q6ZVT0 673 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 LRRN4CLQ8ND94 238 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 PROKR1Q8TCW9 393 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 OR4K3Q96R72 315 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 GPR22Q99680 433 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 ZFYVE21Q9BQ24 234 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 TRIM55Q9BYV6 548 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 UNKQ9C0B0 810 aaKnown RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 CCDC177Q9NQR7 707 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 CUTCQ9NTM9 273 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 SRPK3Q9UPE1 567 aa17.42■□□□□ 0.38
DDX39A-212ENST00000590260 MDC1Q14676 2089 aaKnown RBP17.42■□□□□ 0.38
DDX39A-212ENST00000590260 ZNF839A8K0R7 811 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 H7BY64 318 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 K7EM74 188 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 DSCR3O14972 297 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 PHGDHO43175 533 aaKnown RBP17.41■□□□□ 0.38
DDX39A-212ENST00000590260 ABATP80404 500 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 DCDP81605 110 aaKnown RBP17.41■□□□□ 0.38
DDX39A-212ENST00000590260 NAE1Q13564 534 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 ZKSCAN8Q15776 578 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-212ENST00000590260 HKDC1Q2TB90 917 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 TCTE1Q5JU00 501 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 PRAMEF13Q5VWM6 474 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 CPZQ66K79 652 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 SHISA5Q8N114 240 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 SPATA6LQ8N4H0 392 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 OR56A3Q8NH54 315 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 PYCR2Q96C36 320 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 PRAP1Q96NZ9 151 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 CPNE1Q99829 537 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 NDC1Q9BTX1 674 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 SLC7A5P2Q9GIP4 190 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 GEMIN8Q9NWZ8 242 aaKnown RBP17.41■□□□□ 0.38
DDX39A-212ENST00000590260 NINJ2Q9NZG7 142 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 ANKRD12Q6UB98 2062 aa17.41■□□□□ 0.38
DDX39A-212ENST00000590260 A0A1B0GX78 115 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 HMX2A2RU54 273 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 DNAJB5O75953 348 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 TUBB4AP04350 444 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 UMODP07911 640 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 NPPBP16860 134 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 GP5P40197 560 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 CCR10P46092 362 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 CSRP3P50461 194 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 CSNK1G2P78368 415 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 RELAQ04206 551 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 KCNAB2Q13303 367 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 GRM7Q14831 915 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 VN1R4Q7Z5H5 301 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 METTL27Q8N6F8 245 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-212ENST00000590260 FBXL8Q96CD0 374 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 ARHGAP9Q9BRR9 750 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 FAM117AQ9C073 453 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 POPDC3Q9HBV1 291 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 TXLNGQ9NUQ3 528 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 IRAK4Q9NWZ3 460 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 UTP6Q9NYH9 597 aaKnown RBP17.4■□□□□ 0.38
DDX39A-212ENST00000590260 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 NOVA2Q9UNW9 492 aaKnown RBP17.4■□□□□ 0.38
DDX39A-212ENST00000590260 POLHQ9Y253 713 aa17.4■□□□□ 0.38
DDX39A-212ENST00000590260 RUVBL1Q9Y265 456 aaKnown RBP17.4■□□□□ 0.38
DDX39A-212ENST00000590260 MRPS2Q9Y399 296 aaKnown RBP17.4■□□□□ 0.38
DDX39A-212ENST00000590260 HYKKA2RU49 373 aa17.39■□□□□ 0.37
DDX39A-212ENST00000590260 CTAGE15A4D2H0 777 aa17.39■□□□□ 0.37
DDX39A-212ENST00000590260 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-212ENST00000590260 LCMT2O60294 686 aaKnown RBP17.39■□□□□ 0.37
DDX39A-212ENST00000590260 CCNDBP1O95273 360 aa17.39■□□□□ 0.37
DDX39A-212ENST00000590260 GUCA1CO95843 209 aa17.39■□□□□ 0.37
DDX39A-212ENST00000590260 STATHP02808 62 aa17.39■□□□□ 0.37
DDX39A-212ENST00000590260 CTAGE8P0CG41 777 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 701.2 ms