RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 IMPA1P29218 277 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 FOLR3P41439 243 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 OR1D4P47884 311 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 CAV1Q03135 178 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 CHAF1BQ13112 559 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ATMQ13315 3056 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 NAE1Q13564 534 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 SSPNQ14714 243 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 TRADDQ15628 312 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 C3orf62Q6ZUJ4 267 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ZC3HC1Q86WB0 502 aaKnown RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 CCDC25Q86WR0 208 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 RAB43Q86YS6 212 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 METTL27Q8N6F8 245 aaPredicted RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 CDKL2Q92772 493 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 RERGQ96A58 199 aaPredicted RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 PTERQ96BW5 349 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 PRAP1Q96NZ9 151 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 SMG1Q96Q15 3661 aaKnown RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 OLFM1Q99784 485 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ZFYVE21Q9BQ24 234 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ING2Q9H160 280 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 CCDC177Q9NQR7 707 aaPredicted RBP11.56□□□□□ -0.56
TPM4-212ENST00000590180 NSMCE4AQ9NXX6 385 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 GRHL1Q9NZI5 618 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 ANKMY1Q9P2S6 941 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 KALRNO60229 2985 aa11.56□□□□□ -0.56
TPM4-212ENST00000590180 FAM95CA0A1B0GW59 222 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 PEX12O00623 359 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 DSCR3O14972 297 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 KLF7O75840 302 aaPredicted RBP11.55□□□□□ -0.56
TPM4-212ENST00000590180 PIAS1O75925 651 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 DNAJB5O75953 348 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 PMS2P54278 862 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SLC7A5Q01650 507 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 CBLBQ13191 982 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SP140Q13342 867 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 AGTRAPQ6RW13 159 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 MBOAT1Q6ZNC8 495 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 RNF44Q7L0R7 432 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 OVCH1Q7RTY7 1134 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SLC26A11Q86WA9 606 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 PAQR7Q86WK9 346 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 APLFQ8IW19 511 aaPredicted RBP11.55□□□□□ -0.56
TPM4-212ENST00000590180 LRRC56Q8IYG6 542 aaPredicted RBP11.55□□□□□ -0.56
TPM4-212ENST00000590180 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.55□□□□□ -0.56
TPM4-212ENST00000590180 VPS39Q96JC1 886 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 ZNF285Q96NJ3 590 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 LRRC1Q9BTT6 524 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 YIPF2Q9BWQ6 316 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 TRIM55Q9BYV6 548 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 PCBD2Q9H0N5 130 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SMYD2Q9NRG4 433 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 SLC22A11Q9NSA0 550 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 TMEM184CQ9NVA4 438 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 CUEDC1Q9NWM3 386 aaPredicted RBP11.55□□□□□ -0.56
TPM4-212ENST00000590180 ARL15Q9NXU5 204 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 TXNDC16Q9P2K2 825 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 MAU2Q9Y6X3 613 aa11.55□□□□□ -0.56
TPM4-212ENST00000590180 MED13Q9UHV7 2174 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 CCDC88CQ9P219 2028 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 IGKV1-8A0A0C4DH67 115 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 FITM1A5D6W6 292 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 A6NL46 340 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 CXorf49A8MYA2 514 aaPredicted RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 GUCA1CO95843 209 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 TSPAN12O95859 305 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 HRH2P25021 359 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 MAGEA4P43358 317 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 GCGRP47871 477 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 FOXL2P58012 376 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 TAS2R39P59534 338 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 TBPL1P62380 186 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 PHKG1Q16816 387 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 LACTB2Q53H82 288 aaPredicted RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 PRAMEF13Q5VWM6 474 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 CPZQ66K79 652 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 ZNF425Q6IV72 752 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 CAPN13Q6MZZ7 669 aaPredicted RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 C8orf74Q6P047 294 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 MRPL14Q6P1L8 145 aaKnown RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 ATG14Q6ZNE5 492 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 ZNF572Q7Z3I7 529 aaPredicted RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 PLD3Q8IV08 490 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 CTAGE3PQ8IX95 158 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 NKAPQ8N5F7 415 aaKnown RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 CSNK1A1LQ8N752 337 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 FBXO25Q8TCJ0 367 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 ADAMTS17Q8TE56 1095 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 RHOJQ9H4E5 214 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms