RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TTLL10Q6ZVT0 673 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 NDUFAF7Q7L592 441 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 TMC3Q7Z5M5 1100 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 LAPTM4BQ86VI4 370 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 CPNE8Q86YQ8 564 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 LIX1LQ8IVB5 337 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 EID3Q8N140 333 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 RASGEF1CQ8N431 466 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 DNAJC22Q8N4W6 341 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 METTL27Q8N6F8 245 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 PLD5Q8N7P1 536 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 BEND7Q8N7W2 519 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 ACVR1CQ8NER5 493 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 ACTL9Q8TC94 416 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 LCN9Q8WX39 176 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 RND1Q92730 232 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 Q96MF0 132 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 POLR1EQ9GZS1 481 aaKnown RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 CHRNA10Q9GZZ6 450 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 XKR8Q9H6D3 395 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PCDH9Q9HC56 1237 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 ACTR10Q9NZ32 417 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 KLHL8Q9P2G9 620 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 NXT1Q9UKK6 140 aaKnown RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 MKL2Q9ULH7 1088 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 RPL26L1Q9UNX3 145 aaKnown RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 SHOC2Q9UQ13 582 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 TTLL3Q9Y4R7 772 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 CR1P17927 2039 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 A0A1B0GTH9 108 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 C3orf70A6NLC5 250 aaPredicted RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 C2orf74A8MZ97 194 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 IDSB3KWA1 339 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 ANKRD66B4E2M5 251 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 E7EVH7 732 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 DSCR3O14972 297 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TTI1O43156 1089 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 PHF1O43189 567 aaPredicted RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 PHF2O75151 1096 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 MLYCDO95822 493 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 SLC4A1P02730 911 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 UGT2B7P16662 529 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 CCNCP24863 283 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 MCM3P25205 808 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 KIR2DL3P43628 341 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 OR1D4P47884 311 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 NR0B1P51843 470 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 SARNPP82979 210 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 GBE1Q04446 702 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 EEF1A2Q05639 463 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 ITKQ08881 620 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 GALNT2Q10471 571 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 PMPCAQ10713 525 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 SNX1Q13596 522 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 DHX34Q14147 1143 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 NOMO1Q15155 1222 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TAZQ16635 292 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 KRTAP24-1Q3LI83 254 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 ABHD17BQ5VST6 288 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 C8orf74Q6P047 294 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 PODNL1Q6PEZ8 512 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 CNSTQ6PJW8 725 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 CCDC137Q6PK04 289 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 RIPOR1Q6ZS17 1223 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 SYDE1Q6ZW31 735 aaPredicted RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 NLRP9Q7RTR0 991 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 PRSS58Q8IYP2 241 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 BEST3Q8N1M1 668 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 OR52E1Q8NGJ3 308 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 STT3BQ8TCJ2 826 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 C1orf54Q8WWF1 131 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 N4BP2L2Q92802 583 aaPredicted RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 TMEM125Q96AQ2 219 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 QKIQ96PU8 341 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS25-204ENST00000589577 OR2A14Q96R47 310 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TRIB3Q96RU7 358 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 NPAS2Q99743 824 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 MENTQ9BUN1 341 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 RAB17Q9H0T7 212 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 ANKRD10Q9NXR5 420 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 SPHK1Q9NYA1 384 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 FAM8A1Q9UBU6 413 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 ASIC3Q9UHC3 531 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 AMACRQ9UHK6 382 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 GNPTGQ9UJJ9 305 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 C3orf18Q9UK00 162 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 TRHDEQ9UKU6 1024 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 UTP11Q9Y3A2 253 aaKnown RBP5.78□□□□□ -1.48
VPS25-204ENST00000589577 MRFAP1Q9Y605 127 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 ABCA1O95477 2261 aa5.78□□□□□ -1.48
VPS25-204ENST00000589577 NBEAL2Q6ZNJ1 2754 aa5.77□□□□□ -1.49
VPS25-204ENST00000589577 GAPDHSO14556 408 aaPredicted RBP5.77□□□□□ -1.49
VPS25-204ENST00000589577 AURKAO14965 403 aa5.77□□□□□ -1.49
VPS25-204ENST00000589577 MATN3O15232 486 aa5.77□□□□□ -1.49
VPS25-204ENST00000589577 PSMD3O43242 534 aa5.77□□□□□ -1.49
VPS25-204ENST00000589577 MAP3K7O43318 606 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms