RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PTCD3Q96EY7 689 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 TGM7Q96PF1 710 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ACAT2Q9BWD1 397 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 GSTO2Q9H4Y5 243 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 MANSC1Q9H8J5 431 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ACTR8Q9H981 624 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ABCF3Q9NUQ8 709 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 TMEM184CQ9NVA4 438 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 SEMA5BQ9P283 1151 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 PDP2Q9P2J9 529 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ASB1Q9Y576 335 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ASXL3Q9C0F0 2248 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 A0A1W2PQM1 296 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 EZRP15311 586 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 PSMB5P28074 263 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 CSF2RBP32927 897 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 HNF4AP41235 474 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 CASP2P42575 452 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 IRF8Q02556 426 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 STX3Q13277 289 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 E2F2Q14209 437 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 TUBB8Q3ZCM7 444 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 NKAIN2Q5VXU1 208 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 NXPE4Q6UWF7 544 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 RGS9BPQ6ZS82 235 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 TMPRSS11BQ86T26 416 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 KRT78Q8N1N4 520 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 DEFB124Q8NES8 71 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 GRAMD1AQ96CP6 724 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 REPS1Q96D71 796 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 SEC16BQ96JE7 1060 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 TMEM74Q96NL1 305 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 AIF1LQ9BQI0 150 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 RTKNQ9BST9 563 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 SEMA4BQ9NPR2 832 aaPredicted RBP16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 THAP1Q9NVV9 213 aa16.33■□□□□ 0.2
SCAMP4-211ENST00000588907 LRRC14BA6NHZ5 514 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 E7EQ34 232 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 TM4SF5O14894 197 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 RASSF9O75901 435 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 CLDN9O95484 217 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ZBTB11O95625 1053 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ESRRBO95718 433 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 HSPA4LO95757 839 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ENO1P06733 434 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 C1GALT1C1LP0DN25 315 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 CDH1P12830 882 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 BGNP21810 368 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 SERPINB1P30740 379 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ARL1P40616 181 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ABCE1P61221 599 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 CHIT1Q13231 466 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 HIST2H2ACQ16777 129 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 XKR6Q5GH73 641 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 HIST2H2AA3Q6FI13 130 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 CYB5D1Q6P9G0 228 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 RBM44Q6ZP01 1051 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 GPRIN3Q6ZVF9 776 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 USP53Q70EK8 1073 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 AFAP1L2Q8N4X5 818 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 L3MBTL4Q8NA19 623 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 UNC13CQ8NB66 2214 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 TTLQ8NG68 377 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 OR4K1Q8NGD4 311 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 TRPC4APQ8TEL6 797 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 TCTN2Q96GX1 697 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 NRTNQ99748 197 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 PLCD4Q9BRC7 762 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 NUDT22Q9BRQ3 303 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 DPH7Q9BTV6 452 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 TRPS1Q9UHF7 1281 aa16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.32■□□□□ 0.2
SCAMP4-211ENST00000588907 OR7A17O14581 309 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 WFS1O76024 890 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 DKK1O94907 266 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 THRAP10827 490 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 MDH1P40925 334 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 GRIA3P42263 894 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 SLC1A6P48664 564 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ARL4DP49703 201 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 CDH13P55290 713 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 GFERP55789 205 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 RPS15AP62244 130 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZC3H12BQ5HYM0 836 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 CACHD1Q5VU97 1274 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 KIAA1614Q5VZ46 1190 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 GRHL2Q6ISB3 625 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF425Q6IV72 752 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 FIGLAQ6QHK4 219 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZCCHC23Q6ZST2 131 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 FAM92BQ6ZTR7 304 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms