RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
RFX1-204ENST00000588885 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.09□□□□□ -0.63
RFX1-204ENST00000588885 TMEM151BQ8IW70 566 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 RAB42Q8N4Z0 105 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 SLC22A18Q96BI1 424 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 MRRFQ96E11 262 aaKnown RBP11.09□□□□□ -0.63
RFX1-204ENST00000588885 PAFAH2Q99487 392 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 NDC1Q9BTX1 674 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 CCDC68Q9H2F9 335 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 INTS10Q9NVR2 710 aaKnown RBP11.09□□□□□ -0.63
RFX1-204ENST00000588885 MOCS1Q9NZB8 636 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 NDOR1Q9UHB4 597 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 GPN3Q9UHW5 284 aaPredicted RBP11.09□□□□□ -0.63
RFX1-204ENST00000588885 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 FBXO5Q9UKT4 447 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 TCFL5Q9UL49 500 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 AP1M2Q9Y6Q5 423 aa11.09□□□□□ -0.63
RFX1-204ENST00000588885 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 COL12A1Q99715 3063 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 A6NL46 340 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 POC1B-GALNT4F8VUJ3 575 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ATP8B1O43520 1251 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 PRICKLE3O43900 615 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 NRP2O60462 931 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 CTSVO60911 334 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 MATN4O95460 622 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 RECKO95980 971 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 PDGFAP04085 211 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 OTX2P32243 289 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ADARP55265 1226 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 DCDP81605 110 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 GBX1Q14549 363 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 RHBDD2Q6NTF9 364 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 TLDC1Q6P9B6 456 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 SUSD1Q6UWL2 747 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 TTLL10Q6ZVT0 673 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ASB18Q6ZVZ8 466 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 CTAGE3PQ8IX95 158 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 METTL27Q8N6F8 245 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 PPM1NQ8N819 430 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 OR9A1PQ8NGU1 263 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 MAGEC3Q8TD91 643 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 THAP4Q8WY91 577 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 GBP5Q96PP8 586 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 CYTH2Q99418 400 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 PKP4Q99569 1192 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 NDNQ99608 321 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 GPR21Q99679 349 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 RAB11FIP5Q9BXF6 653 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 CHRNA10Q9GZZ6 450 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ING2Q9H160 280 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 ACBD3Q9H3P7 528 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 PPANQ9NQ55 473 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 ACSS2Q9NR19 701 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 TXLNGQ9NUQ3 528 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 INTS7Q9NVH2 962 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 STOX2Q9P2F5 926 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 IFT80Q9P2H3 777 aaPredicted RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 PTRH2Q9Y3E5 179 aaKnown RBP11.08□□□□□ -0.64
RFX1-204ENST00000588885 SEC16AO15027 2179 aa11.08□□□□□ -0.64
RFX1-204ENST00000588885 LOC105369274A0A096LPK9 316 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 LOC102723532A0A0G2JNH3 316 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 A0A0J9YVX5 310 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 A0A1W2PPV9 198 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 FAM155BO75949 473 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 EIF2S1P05198 315 aaKnown RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 ATP5DP30049 168 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 RPA3P35244 121 aaPredicted RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 NAB1Q13506 487 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 RAPSNQ13702 412 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 ATP1A4Q13733 1029 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 CYP2A13Q16696 494 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 TTLL9Q3SXZ7 439 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 PIWIL4Q7Z3Z4 852 aaKnown RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 CPNE9Q8IYJ1 553 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 OR4N4Q8N0Y3 316 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 DTWD1Q8N5C7 304 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 PPFIBP2Q8ND30 876 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 OR2L3Q8NG85 312 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 OR2A1Q8NGT9 310 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 CALML6Q8TD86 181 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 DCAKDQ8WVC6 231 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 SLC44A1Q8WWI5 657 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 DPH2Q9BQC3 489 aaPredicted RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 SELENOSQ9BQE4 189 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 FAM167BQ9BTA0 163 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 DPH7Q9BTV6 452 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 TMEM109Q9BVC6 243 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 PSMC3IPQ9P2W1 217 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms