RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 PGM2Q96G03 612 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 FCRL4Q96PJ5 515 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 OR4K3Q96R72 315 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 CAPS2Q9BXY5 557 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 CD244Q9BZW8 370 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 FAM60AQ9NP50 221 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 ASCL3Q9NQ33 180 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 THSD1Q9NS62 852 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 TMEM184CQ9NVA4 438 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 DNAJC11Q9NVH1 559 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 CPSF2Q9P2I0 782 aaKnown RBP18.41■□□□□ 0.54
DDX39A-204ENST00000586558 DKK4Q9UBT3 224 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 RARRES3Q9UL19 164 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 GRID1Q9ULK0 1009 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 PLCL2Q9UPR0 1127 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 SLC22A14Q9Y267 594 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 KLHL20Q9Y2M5 609 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 DYRK1BQ9Y463 629 aa18.41■□□□□ 0.54
DDX39A-204ENST00000586558 TNPO3Q9Y5L0 923 aaKnown RBP18.41■□□□□ 0.54
DDX39A-204ENST00000586558 IGKV1-8A0A0C4DH67 115 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 CDRT15L2A8MXV6 281 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 FOXO6A8MYZ6 492 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 BRINP1O60477 761 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 FGF5P12034 268 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 TAC1P20366 129 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 HSPA7P48741 367 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 YBX1P67809 324 aaKnown RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 PFKFB4Q16877 469 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 RNF44Q7L0R7 432 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 PAQR7Q86WK9 346 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 PPP1R3BQ86XI6 285 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 SRRM1Q8IYB3 904 aaKnown RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 DNAJC22Q8N4W6 341 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 ABHD11Q8NFV4 315 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 N4BP2L2Q92802 583 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 ZNF501Q96CX3 271 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 ZNF578Q96N58 590 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 RUFY1Q96T51 708 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 STMN4Q9H169 189 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 CUEDC1Q9NWM3 386 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-204ENST00000586558 GPRC5BQ9NZH0 403 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 TMEM216Q9P0N5 145 aa18.4■□□□□ 0.54
DDX39A-204ENST00000586558 STX16-NPEPL1H3BU86 382 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 STX16O14662 325 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 PRAMEF10O60809 474 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 GNAZP19086 355 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 CD82P27701 267 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 GDF5P43026 501 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 GABRA4P48169 554 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 CCR8P51685 355 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 CDC16Q13042 620 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 GPR19Q15760 415 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 PDK4Q16654 411 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 C18orf21Q32NC0 220 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-204ENST00000586558 CCDC153Q494R4 210 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 ADCK2Q7Z695 626 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 C4orf33Q8N1A6 199 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 TMEM151AQ8N4L1 468 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 SLC5A11Q8WWX8 675 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 USP7Q93009 1102 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 NEIL2Q969S2 332 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 APOPT1Q96IL0 206 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 SMC6Q96SB8 1091 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 ZFYVE21Q9BQ24 234 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 OPTCQ9UBM4 332 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 SERTAD3Q9UJW9 196 aa18.39■□□□□ 0.53
DDX39A-204ENST00000586558 GOLGA6L10A6NI86 522 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 C9orf172C9J069 976 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 H7BY64 318 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 K7EPI3 171 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 CTSVO60911 334 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 SBK3P0C264 359 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 MYZAPP0CAP1 466 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 CDH1P12830 882 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 GRK3P35626 688 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PIK3CGP48736 1102 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 ITGA1P56199 1179 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 NFKB2Q00653 900 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PCBP2Q15366 365 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■■■■■ 27.4
DDX39A-204ENST00000586558 TBC1D25Q3MII6 688 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 MCATQ8IVS2 390 aaKnown RBP18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PTGR2Q8N8N7 351 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-204ENST00000586558 BANPQ8N9N5 519 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 RDH11Q8TC12 318 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PKNOX2Q96KN3 472 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PRAP1Q96NZ9 151 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 TMEM121BQ9BXQ6 578 aaPredicted RBP18.38■□□□□ 0.53
DDX39A-204ENST00000586558 IQCGQ9H095 443 aaKnown RBP18.38■□□□□ 0.53
DDX39A-204ENST00000586558 EHD1Q9H4M9 534 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PELI2Q9HAT8 420 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 APMAPQ9HDC9 416 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 PILRAQ9UKJ1 303 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 ACSL6Q9UKU0 697 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 SH2B3Q9UQQ2 575 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 B3GALT1Q9Y5Z6 326 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 ADAMTS20P59510 1910 aa18.38■□□□□ 0.53
DDX39A-204ENST00000586558 AKAP13Q12802 2813 aa18.37■□□□□ 0.53
DDX39A-204ENST00000586558 KIF26BQ2KJY2 2108 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms