RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FRG2Q64ET8 278 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 HIST2H2AA3Q6FI13 130 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 GRHL2Q6ISB3 625 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 PAOXQ6QHF9 649 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 SCIMPQ6UWF3 145 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 BNC2Q6ZN30 1099 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 GK5Q6ZS86 529 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 ZFAND4Q86XD8 727 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 MYLK4Q86YV6 388 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 SYTL1Q8IYJ3 562 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 TMEFF1Q8IYR6 380 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 LILRA3Q8N6C8 439 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 GLB1L3Q8NCI6 653 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 FBXO27Q8NI29 283 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 HMGB4Q8WW32 186 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 SELENOMQ8WWX9 145 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 JADE3Q92613 823 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 UBE2E3Q969T4 207 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 WDR34Q96EX3 536 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CMTM7Q96FZ5 175 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 MARK4Q96L34 752 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 FRG2BQ96QU4 278 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 TRIT1Q9H3H1 467 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 DENND2DQ9H6A0 471 aaPredicted RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 BRF2Q9HAW0 419 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 LRTM1Q9HBL6 345 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 TMEM9BQ9NQ34 198 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 INTS7Q9NVH2 962 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 NMRK1Q9NWW6 199 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 USP36Q9P275 1121 aaKnown RBP10.06□□□□□ -0.8
LIG3-203ENST00000585370 CROTQ9UKG9 612 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 MAPRE3Q9UPY8 281 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 DMTF1Q9Y222 760 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 ASF1AQ9Y294 204 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 OR1A2Q9Y585 309 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 HEBP2Q9Y5Z4 205 aa10.06□□□□□ -0.8
LIG3-203ENST00000585370 CELSR3Q9NYQ7 3312 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 BPTFQ12830 3046 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 A0A1W2PP18 115 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 MRASO14807 208 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 FFAR3O14843 346 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ANGPT2O15123 496 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 CFLARO15519 480 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 GPR42O15529 346 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 MAP3K13O43283 966 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 FKBP6O75344 327 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ZNF217O75362 1048 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 SEC22BO75396 215 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 GABRG2P18507 467 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 CXCR2P25025 360 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 HTR6P50406 440 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 POLR2JP52435 117 aaKnown RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 MTTPP55157 894 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ACTR3P61158 418 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 DOC2AQ14183 400 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 NFATC4Q14934 902 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 PYCR3Q53H96 274 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 TRIM61Q5EBN2 209 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 XKR6Q5GH73 641 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 C1orf146Q5VVC0 180 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 IL23RQ5VWK5 629 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ATG9BQ674R7 924 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 REP15Q6BDI9 236 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 LCTLQ6UWM7 567 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 WASH2PQ6VEQ5 465 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 FAM83HQ6ZRV2 1179 aaPredicted RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 ARMCX6Q7L4S7 300 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 DCBLD1Q8N8Z6 715 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 OR2T11Q8NH01 316 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 OR5K2Q8NHB8 316 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 HMGCLL1Q8TB92 370 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ZNF480Q8WV37 535 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 KLK6Q92876 244 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 STMN2Q93045 179 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 PYCR2Q96C36 320 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 MED8Q96G25 268 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 CDRT15Q96T59 188 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 EFCAB11Q9BUY7 163 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 PITHD1Q9GZP4 211 aaPredicted RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 MVB12BQ9H7P6 319 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 WASH6PQ9NQA3 447 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 CCDC177Q9NQR7 707 aaPredicted RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 SLC23A2Q9UGH3 650 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 SLC7A8Q9UHI5 535 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 ADGRE2Q9UHX3 823 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 LEF1Q9UJU2 399 aaPredicted RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 WASF3Q9UPY6 502 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 TSC22D4Q9Y3Q8 395 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms