RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 HPS6Q86YV9 775 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 GPATCH11Q8N954 259 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 EEF1AKMT1Q8WVE0 214 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 NACC2Q96BF6 587 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 HIST1H2AHQ96KK5 128 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 HIST1H2AJQ99878 128 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 H2AFJQ9BTM1 129 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 EPN3Q9H201 632 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 WDR54Q9H977 334 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 SLC6A20Q9NP91 592 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
SS18-225ENST00000585121 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 TEX264Q9Y6I9 313 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 MYO18BQ8IUG5 2567 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 LOC105369274A0A096LPK9 316 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 LOC102723532A0A0G2JNH3 316 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 H0YGG7 62 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 K7EM74 188 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 SLC16A5O15375 505 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PRPF4O43172 522 aaKnown RBP eCLIP11.83□□□□□ -0.52
SS18-225ENST00000585121 ONECUT2O95948 504 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
SS18-225ENST00000585121 IL2P60568 153 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 ARF3P61204 181 aaPredicted RBP11.83□□□□□ -0.52
SS18-225ENST00000585121 OCA2Q04671 838 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PDIA2Q13087 525 aaKnown RBP11.83□□□□□ -0.52
SS18-225ENST00000585121 CALCOCO2Q13137 446 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 FRG1Q14331 258 aaKnown RBP11.83□□□□□ -0.52
SS18-225ENST00000585121 FAM45BPQ6NSW5 357 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PAQR3Q6TCH7 311 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PAQR7Q86WK9 346 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 OR4N4Q8N0Y3 316 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 FAM45AQ8TCE6 357 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 TRIM54Q9BYV2 358 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 SLC26A1Q9H2B4 701 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 PARVBQ9HBI1 364 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 ZNF304Q9HCX3 659 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 ZFATQ9P243 1243 aa11.83□□□□□ -0.52
SS18-225ENST00000585121 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 DPM1O60762 260 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 CEACAM4O75871 244 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 ZIC2O95409 532 aaPredicted RBP11.82□□□□□ -0.52
SS18-225ENST00000585121 ALPPP05187 535 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 CCND1P24385 295 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 GABRB3P28472 473 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 IMPA1P29218 277 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 OR1D4P47884 311 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 EMP3P54852 163 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 CDKN2DP55273 166 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 RELAQ04206 551 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 MGAT5Q09328 741 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 ILF2Q12905 390 aaKnown RBP11.82□□□□□ -0.52
SS18-225ENST00000585121 NKG7Q16617 165 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 RBM20Q5T481 1227 aaKnown RBP11.82□□□□□ -0.52
SS18-225ENST00000585121 HECTD2Q5U5R9 776 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 STEAP4Q687X5 459 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 ANKMY2Q8IV38 441 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 METTL27Q8N6F8 245 aaPredicted RBP11.82□□□□□ -0.52
SS18-225ENST00000585121 CSNK1A1LQ8N752 337 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 LINGO1Q96FE5 620 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 SLC22A11Q9NSA0 550 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 P4HTMQ9NXG6 502 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 NSMCE4AQ9NXX6 385 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 CDC23Q9UJX2 597 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 PDE10AQ9Y233 779 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 VWA7Q9Y334 891 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 MAU2Q9Y6X3 613 aa11.82□□□□□ -0.52
SS18-225ENST00000585121 CNOT3O75175 753 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 ANXA5P08758 320 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 FBLP22087 321 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 MMP11P24347 488 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 YBX1P67809 324 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 TIAL1Q01085 375 aaKnown RBP eCLIP11.81□□□□□ -0.52
SS18-225ENST00000585121 RBBP7Q16576 425 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 NDUFA9Q16795 377 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 PRTGQ2VWP7 1150 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 DCAF10Q5QP82 559 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 PRAMEF13Q5VWM6 474 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 ZNF425Q6IV72 752 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 C17orf64Q86WR6 236 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 GALNT16Q8N428 558 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 FBXO36Q8NEA4 188 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 FDCSPQ8NFU4 85 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 ALKBH8Q96BT7 664 aaKnown RBP11.81□□□□□ -0.52
SS18-225ENST00000585121 MIEF2Q96C03 454 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
SS18-225ENST00000585121 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms