RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ZFYVE21Q9BQ24 234 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 SELENOSQ9BQE4 189 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 CHST8Q9H2A9 424 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 CDC42EP4Q9H3Q1 356 aaKnown RBP15.57■□□□□ 0.08
ERBB2-222ENST00000584908 CAB39LQ9H9S4 337 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 ARL15Q9NXU5 204 aa15.57■□□□□ 0.08
ERBB2-222ENST00000584908 UTP6Q9NYH9 597 aaKnown RBP15.57■□□□□ 0.08
ERBB2-222ENST00000584908 CCDC88CQ9P219 2028 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 SMG1Q96Q15 3661 aaKnown RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 CDC7O00311 574 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 ATXN7O15265 892 aaPredicted RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 FAM155BO75949 473 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 ONECUT2O95948 504 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 PTPN4P29074 926 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 ARSFP54793 590 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 RAB10P61026 200 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 CDC20Q12834 499 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 NAE1Q13564 534 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 EFTUD2Q15029 972 aaKnown RBP eCLIP15.56■□□□□ 0.087e-7■■■■□ 24.2
ERBB2-222ENST00000584908 UBAP2Q5T6F2 1119 aaKnown RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 PRAMEF13Q5VWM6 474 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 FRMPD2BQ6IN97 320 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 LCN10Q6JVE6 187 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 FAM198BQ6UWH4 519 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 LCTLQ6UWM7 567 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 ADAMTSL2Q86TH1 951 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 CATSPER2Q96P56 530 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 NLNQ9BYT8 704 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 ATG10Q9H0Y0 220 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 TMEM184CQ9NVA4 438 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 RALYQ9UKM9 306 aaKnown RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 OARD1Q9Y530 152 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 MRPS18BQ9Y676 258 aaKnown RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 TLN1Q9Y490 2541 aaKnown RBP15.56■□□□□ 0.08
ERBB2-222ENST00000584908 BOD1L1Q8NFC6 3051 aa15.56■□□□□ 0.08
ERBB2-222ENST00000584908 PABPN1LA6NDY0 278 aaKnown RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 TK2O00142 265 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 NKX2-8O15522 239 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 CREG1O75629 220 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 NPPBP16860 134 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 SLC26A3P40879 764 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 EMP3P54852 163 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 RPS15P62841 145 aaKnown RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 CYP4F2P78329 520 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 TSTA3Q13630 321 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 GRM7Q14831 915 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 SLMAPQ14BN4 828 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 SOWAHCQ53LP3 525 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 THEMIS2Q5TEJ8 643 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 CAPN13Q6MZZ7 669 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 EIF1ADQ8N9N8 165 aaKnown RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 LRRN4CLQ8ND94 238 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 BBC3Q96PG8 261 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 OR2A5Q96R48 311 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 RUFY1Q96T51 708 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 C17orf62Q9BQA9 187 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 NDC1Q9BTX1 674 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 SLC7A5P2Q9GIP4 190 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 ACTL8Q9H568 366 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 CUEDC1Q9NWM3 386 aaPredicted RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 CTNNAL1Q9UBT7 734 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 NFU1Q9UMS0 254 aa15.55■□□□□ 0.08
ERBB2-222ENST00000584908 FARSAQ9Y285 508 aaKnown RBP15.55■□□□□ 0.08
ERBB2-222ENST00000584908 LOC105369274A0A096LPK9 316 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 LOC102723532A0A0G2JNH3 316 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 A0A0J9YVX5 310 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 HMX2A2RU54 273 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 NPEPPSL1A6NEC2 478 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 PHGDHO43175 533 aaKnown RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 SLC35E2BP0CK96 405 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 CCDC166P0CW27 439 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 CD1DP15813 335 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 AGXTP21549 392 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 VSX2P58304 361 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 ATP6V0D1P61421 351 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 DCDP81605 110 aaKnown RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 TSNQ15631 228 aaKnown RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 PRTGQ2VWP7 1150 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 FAM214AQ32MH5 1076 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 PTCHD3Q3KNS1 767 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 LINC00303Q3SY05 128 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 CDKL4Q5MAI5 379 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 WASHC2DQ5SRD0 308 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 CCDC91Q7Z6B0 441 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 SYVN1Q86TM6 617 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 OR4N4Q8N0Y3 316 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 MED8Q96G25 268 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 HAUS8Q9BT25 410 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 DHRS4Q9BTZ2 278 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 SYNPO2LQ9H987 977 aa15.54■□□□□ 0.08
ERBB2-222ENST00000584908 DHCR7Q9UBM7 475 aaKnown RBP15.54■□□□□ 0.08
ERBB2-222ENST00000584908 KCNE1BA0A087WTH5 132 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 A0A1B0GX78 115 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 H0YGG7 62 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 H7BY64 318 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 HAT1O14929 419 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 DSCR3O14972 297 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 KATNA1O75449 491 aa15.53■□□□□ 0.08
ERBB2-222ENST00000584908 ACSL3O95573 720 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms