RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF790Q6PG37 636 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 IL17RELQ6ZVW7 336 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 AMIGO1Q86WK6 493 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 TIGD4Q8IY51 512 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 MR1Q95460 341 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 TSACCQ96A04 125 aaPredicted RBP4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 PGM2Q96G03 612 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 JAKMIP1Q96N16 626 aaKnown RBP4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 MAP3K3Q99759 626 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 ZNF696Q9H7X3 374 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 SCRT2Q9NQ03 307 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 PPANQ9NQ55 473 aaKnown RBP4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 C19orf25Q9UFG5 118 aaPredicted RBP4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 GRID1Q9ULK0 1009 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 GAB2Q9UQC2 676 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 PPP2R2CQ9Y2T4 447 aa4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 MYH14Q7Z406 1995 aaKnown RBP4.98□□□□□ -1.61
SMARCE1-219ENST00000583294 IGHV4-4A0A075B6R2 117 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 KLF11O14901 512 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 EPHB6O15197 1021 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 PPIP5K2O43314 1243 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 GNB3P16520 340 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 SP100P23497 879 aaPredicted RBP4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 TNNT3P45378 269 aaPredicted RBP4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 GNB1P62873 340 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 FAM174BQ3ZCQ3 159 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 GPR33Q49SQ1 333 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 SUSD4Q5VX71 490 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 LYSMD4Q5XG99 296 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 ARHGAP11AQ6P4F7 1023 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 G2E3Q7L622 706 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 KLHL7Q8IXQ5 586 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 FAM76AQ8TAV0 307 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 CORO2AQ92828 525 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 ATP6V1E2Q96A05 226 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 PIGQQ9BRB3 760 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 RIMS4Q9H426 269 aaPredicted RBP4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 ATP13A3Q9H7F0 1226 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 MINDY3Q9H8M7 445 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 PKD2L2Q9NZM6 624 aa4.97□□□□□ -1.61
SMARCE1-219ENST00000583294 SNURFLB1AK76 121 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 EXTL3O43909 919 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 FCGR3BO75015 233 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 GLRA3O75311 464 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 BAG3O95817 575 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 EPORP19235 508 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 HNRNPDQ14103 355 aaKnown RBP4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 ZRANB3Q5FWF4 1079 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 XKR6Q5GH73 641 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 Q6ZTC4 211 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 PIGWQ7Z7B1 504 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 NIPA2Q8N8Q9 360 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 CCDC63Q8NA47 563 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 GPRC5AQ8NFJ5 357 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 TMEM190Q8WZ59 177 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 LRR1Q96L50 414 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 C4orf45Q96LM5 186 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 NDNQ99608 321 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 FAM49AQ9H0Q0 323 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 PHPT1Q9NRX4 125 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 ERAP1Q9NZ08 941 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 OR6C2Q9NZP2 312 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 EPHA6Q9UF33 1036 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 RASAL2Q9UJF2 1139 aa4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 MRPS28Q9Y2Q9 187 aaKnown RBP4.96□□□□□ -1.62
SMARCE1-219ENST00000583294 C5orf52A6NGY3 159 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 CDK2AP2O75956 126 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 AP2A2O94973 939 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 SIX3O95343 332 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 RAF1P04049 648 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 RLN1P04808 185 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 KCNJ1P48048 391 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 DNA2P51530 1060 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 CACNG1Q06432 222 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 RBM39Q14498 530 aaKnown RBP4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 OPCMLQ14982 345 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 EXT1Q16394 746 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 RBBP7Q16576 425 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 CCDC184Q52MB2 194 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 NHSL2Q5HYW2 709 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 TXNRD3NBQ6F5E7 133 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 ZNF449Q6P9G9 518 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 CROCCP3Q8IVE0 287 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 MARVELD2Q8N4S9 558 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 OR7A2PQ8NGA2 310 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 METTL21AQ8WXB1 218 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 SEPT1Q8WYJ6 367 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 DYRK2Q92630 601 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 RIT1Q92963 219 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 ERO1AQ96HE7 468 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 NECTIN4Q96NY8 510 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 KLHL5Q96PQ7 755 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 DUX3Q96PT4 197 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 LITAFQ99732 161 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 MTMR12Q9C0I1 747 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 THAP2Q9H0W7 228 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 ACTL8Q9H568 366 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 LMAN1LQ9HAT1 526 aa4.95□□□□□ -1.62
SMARCE1-219ENST00000583294 ARMCX3Q9UH62 379 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms