RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 TAC1P20366 129 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 ETV5P41161 510 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 GDF5P43026 501 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 HSPA7P48741 367 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 YBX1P67809 324 aaKnown RBP19.26■□□□□ 0.67
TOP3A-213ENST00000582230 SETDB1Q15047 1291 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 C18orf21Q32NC0 220 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-213ENST00000582230 ZNF425Q6IV72 752 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 CEACAM20Q6UY09 585 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 SRRM1Q8IYB3 904 aaKnown RBP19.26■□□□□ 0.67
TOP3A-213ENST00000582230 C4orf33Q8N1A6 199 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 TMEM151AQ8N4L1 468 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 N4BP2L2Q92802 583 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-213ENST00000582230 USP7Q93009 1102 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 PGM2Q96G03 612 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 SMC6Q96SB8 1091 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 DNAJC11Q9NVH1 559 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 MKS1Q9NXB0 559 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 CPSF2Q9P2I0 782 aaKnown RBP19.26■□□□□ 0.67
TOP3A-213ENST00000582230 RARRES3Q9UL19 164 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 PCDHGA7Q9Y5G6 932 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 SPEGQ15772 3267 aa19.26■□□□□ 0.67
TOP3A-213ENST00000582230 H7BY64 318 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 NVLO15381 856 aaKnown RBP19.25■□□□□ 0.67
TOP3A-213ENST00000582230 MYZAPP0CAP1 466 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 FGF5P12034 268 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 EZRP15311 586 aaKnown RBP19.25■□□□□ 0.67
TOP3A-213ENST00000582230 CCR8P51685 355 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 ERVPABLB-1P60509 514 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 GPR19Q15760 415 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 CCDC153Q494R4 210 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 LRRC70Q7Z2Q7 622 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 ABHD11Q8NFV4 315 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 SLC5A11Q8WWX8 675 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 ZNF501Q96CX3 271 aaPredicted RBP19.25■□□□□ 0.67
TOP3A-213ENST00000582230 PRAP1Q96NZ9 151 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 FCRL4Q96PJ5 515 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 STMN4Q9H169 189 aaPredicted RBP19.25■□□□□ 0.67
TOP3A-213ENST00000582230 THSD1Q9NS62 852 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 CUEDC1Q9NWM3 386 aaPredicted RBP19.25■□□□□ 0.67
TOP3A-213ENST00000582230 GPRC5BQ9NZH0 403 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 SERTAD3Q9UJW9 196 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 PLCL2Q9UPR0 1127 aa19.25■□□□□ 0.67
TOP3A-213ENST00000582230 CACNA1AO00555 2505 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 GOLGA6L10A6NI86 522 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 CDRT15L2A8MXV6 281 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 STX16-NPEPL1H3BU86 382 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 STX16O14662 325 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 BRINP1O60477 761 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 CCNT2O60583 730 aaKnown RBP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 SBK3P0C264 359 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 CDH1P12830 882 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 GNAZP19086 355 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 GABRA4P48169 554 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 AGTR2P50052 363 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 CDC16Q13042 620 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 PCBP2Q15366 365 aaKnown RBP eCLIP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 C16orf46Q6P387 395 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 HDXQ7Z353 690 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 ADCK2Q7Z695 626 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 PAQR7Q86WK9 346 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 PPP1R3BQ86XI6 285 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 MCATQ8IVS2 390 aaKnown RBP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 BANPQ8N9N5 519 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 GATA6Q92908 595 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 NEIL2Q969S2 332 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 ESAMQ96AP7 390 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 APOPT1Q96IL0 206 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 ZNF578Q96N58 590 aaPredicted RBP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
TOP3A-213ENST00000582230 CENPHQ9H3R5 247 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 APMAPQ9HDC9 416 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 ASCL3Q9NQ33 180 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 OPTCQ9UBM4 332 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 DKK4Q9UBT3 224 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 PILRAQ9UKJ1 303 aa19.24■□□□□ 0.67
TOP3A-213ENST00000582230 TMEM150CB9EJG8 249 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 K7EPI3 171 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 SRPX2O60687 465 aaPredicted RBP19.23■□□□□ 0.67
TOP3A-213ENST00000582230 CTSVO60911 334 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 GRK3P35626 688 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 PDK4Q16654 411 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 FBXO48Q5FWF7 155 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 TNFAIP8L3Q5GJ75 292 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 RNF44Q7L0R7 432 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 PTGR2Q8N8N7 351 aaPredicted RBP19.23■□□□□ 0.67
TOP3A-213ENST00000582230 SNX31Q8N9S9 440 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 OR4K1Q8NGD4 311 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 PKNOX2Q96KN3 472 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 CTRCQ99895 268 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 ZFYVE21Q9BQ24 234 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 PELI2Q9HAT8 420 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 SH2B3Q9UQQ2 575 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 B3GALT1Q9Y5Z6 326 aa19.23■□□□□ 0.67
TOP3A-213ENST00000582230 C9orf172C9J069 976 aa19.22■□□□□ 0.67
TOP3A-213ENST00000582230 CLGNO14967 610 aa19.22■□□□□ 0.67
TOP3A-213ENST00000582230 PLIN3O60664 434 aa19.22■□□□□ 0.67
TOP3A-213ENST00000582230 ATP5F1P24539 256 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms