RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 FCRLBQ6BAA4 426 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 SERPINA9Q86WD7 417 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 CRLF3Q8IUI8 442 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 ZC3H7AQ8IWR0 971 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 OR13C4Q8NGS5 318 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 SEC16BQ96JE7 1060 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 FSD1LQ9BXM9 530 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 ZC3H7BQ9UGR2 993 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 FFAR3O14843 346 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 GPR42O15529 346 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 NME2P1O60361 137 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 AGTP01019 485 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 CYC1P08574 325 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 C8orf89P0DMQ9 161 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 PTMSP20962 102 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 NME2P22392 152 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 CDKN1CP49918 316 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 FASTKQ14296 549 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 GRB7Q14451 532 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 IQCB1Q15051 598 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 SF1Q15637 639 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 DNAJC21Q5F1R6 531 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 KRTAP1-3Q8IUG1 177 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 LGI4Q8N135 537 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 ZNF567Q8N184 647 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 LMNTD1Q8N9Z9 388 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 ELMO1Q92556 727 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 VAT1Q99536 393 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 KLHL8Q9P2G9 620 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
CSNK1D-219ENST00000581660 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 QSOX1O00391 747 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 MAN1A2O60476 641 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 SEC24DO94855 1032 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 ATE1O95260 518 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 CRTAMO95727 393 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 FTH1P02794 183 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 MC4RP32245 332 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 NR2C2P49116 596 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 BTBD16Q32M84 506 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 RANBP10Q6VN20 620 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 TAX1BP1Q86VP1 789 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 ZZZ3Q8IYH5 903 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 RPRMLQ8N4K4 120 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 POGLUT1Q8NBL1 392 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 LRRN4CLQ8ND94 238 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 MAK16Q9BXY0 300 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 STOX2Q9P2F5 926 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-219ENST00000581660 ANK3Q12955 4377 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 A0A087X0T9 212 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 GABRR3A8MPY1 467 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 H7C0S8 307 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 CCL22O00626 93 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 NRP2O60462 931 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 SLC25A12O75746 678 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 LY6G6DO95868 133 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 SERPINC1P01008 464 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 RAF1P04049 648 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 C8BP07358 591 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 FAM228BP0C875 321 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 ADRA1AP35348 466 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 NUP107P57740 925 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 DBN1Q16643 649 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 SYTL3Q4VX76 610 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 BZW1Q7L1Q6 419 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 CPEB2Q7Z5Q1 589 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 PIANPQ8IYJ0 282 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 C2orf73Q8N5S3 287 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 METTL21AQ8WXB1 218 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 IL17FQ96PD4 163 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 GORASP1Q9BQQ3 440 aa13.06□□□□□ -0.32
CSNK1D-219ENST00000581660 YIPF2Q9BWQ6 316 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms