RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 FASTKD3Q14CZ7 662 aaKnown RBP9.3□□□□□ -0.92
TOP3A-211ENST00000581536 MORF4L2Q15014 288 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 TRADDQ15628 312 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 UGT8Q16880 541 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SPANXN3Q5MJ09 141 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 CPZQ66K79 652 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 RHBDD2Q6NTF9 364 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 PAQR3Q6TCH7 311 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 FAM198BQ6UWH4 519 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SYT10Q6XYQ8 523 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 TTLL10Q6ZVT0 673 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 PIWIL4Q7Z3Z4 852 aaKnown RBP9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SYVN1Q86TM6 617 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 OR2L3Q8NG85 312 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 HMGCLL1Q8TB92 370 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 ADAMTS17Q8TE56 1095 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 ASB11Q8WXH4 323 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 ZUFSPQ96AP4 578 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SLC22A18Q96BI1 424 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 GBP5Q96PP8 586 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 TRIM4Q9C037 500 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 CCDC68Q9H2F9 335 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 ADNPQ9H2P0 1102 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SLC6A20Q9NP91 592 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 PPANQ9NQ55 473 aaKnown RBP9.3□□□□□ -0.92
TOP3A-211ENST00000581536 SLC22A11Q9NSA0 550 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 IRAK4Q9NWZ3 460 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 POLHQ9Y253 713 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 HELZ2Q9BYK8 2649 aaKnown RBP9.3□□□□□ -0.92
TOP3A-211ENST00000581536 COL12A1Q99715 3063 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 NUP210LQ5VU65 1888 aa9.3□□□□□ -0.92
TOP3A-211ENST00000581536 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
TOP3A-211ENST00000581536 TLN1Q9Y490 2541 aaKnown RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 IGKV1-8A0A0C4DH67 115 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 TARM1B6A8C7 271 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 CCDC188H7C350 402 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 MYO1CO00159 1063 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 ZSCAN9O15535 394 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SEC31AO94979 1220 aaKnown RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SLC16A8O95907 504 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 RECKO95980 971 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 PDGFAP04085 211 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 THBS1P07996 1170 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 HBQ1P09105 142 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 MPC1LP0DKB6 136 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 ERGP11308 486 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SFTPCP11686 197 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 AGXTP21549 392 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 ATP5DP30049 168 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 CASQ1P31415 396 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 OR1D4P47884 311 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 PNLIPRP1P54315 467 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 VSX2P58304 361 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 WASHC2DQ5SRD0 308 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 MBOAT1Q6ZNC8 495 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SYDE1Q6ZW31 735 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 NEK10Q6ZWH5 1172 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 UBE2R2Q712K3 238 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 LMNTD2Q8IXW0 634 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 LRRC56Q8IYG6 542 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 METTL27Q8N6F8 245 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SPATA4Q8NEY3 305 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 CALML6Q8TD86 181 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 MAGEC3Q8TD91 643 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 ZNF480Q8WV37 535 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 KCNJ9Q92806 393 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 CERS2Q96G23 380 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SNF8Q96H20 258 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 DPH7Q9BTV6 452 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 DPH5Q9H2P9 285 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 ZC3H7BQ9UGR2 993 aaKnown RBP9.29□□□□□ -0.92
TOP3A-211ENST00000581536 NDOR1Q9UHB4 597 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 SNX7Q9UNH6 387 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 TP53TG5Q9Y2B4 290 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 MAN2B2Q9Y2E5 1009 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 AP1M2Q9Y6Q5 423 aa9.29□□□□□ -0.92
TOP3A-211ENST00000581536 A6NL46 340 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 E7ENX8 843 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 RAD51CO43502 376 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 ZBTB14O43829 449 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 VPS26AO75436 327 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 TTC4O95801 387 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 CATP04040 527 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 EIF2S1P05198 315 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 OTX2P32243 289 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SNRPNP63162 240 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 DCDP81605 110 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 TAP2Q03519 686 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PDIA2Q13087 525 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 NCF4Q15080 339 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 HIF1AQ16665 826 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 ZXDCQ2QGD7 858 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 TTLL9Q3SXZ7 439 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 NKAIN1Q4KMZ8 207 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 HECTD2Q5U5R9 776 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms