RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 JMJD7P0C870 316 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 NELFEP18615 380 aaKnown RBP14.94□□□□□ -0.02
SS18-216ENST00000580751 SPINK2P20155 84 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 CMPK1P30085 196 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 KCNC1P48547 511 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 SEPHS1P49903 392 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 HERVK_113P63132 956 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 HSD11B2P80365 405 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 C3orf38Q5JPI3 329 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 THEMIS2Q5TEJ8 643 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 PRAMEF13Q5VWM6 474 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 SULT1C3Q6IMI6 304 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 CYB5D1Q6P9G0 228 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 SUSD1Q6UWL2 747 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 TRIM73Q86UV7 250 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 MARCH9Q86YJ5 346 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 FBXO39Q8N4B4 442 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 C19orf47Q8N9M1 422 aaKnown RBP14.94□□□□□ -0.02
SS18-216ENST00000580751 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 OR2L3Q8NG85 312 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 OR2A1Q8NGT9 310 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 OR56A3Q8NH54 315 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 PPP1R14CQ8TAE6 165 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 NXPE2Q96DL1 559 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 CHMP6Q96FZ7 201 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 PPM1MQ96MI6 270 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 TRAPPC9Q96Q05 1148 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 ERVK-6Q9BXR3 956 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 ATG10Q9H0Y0 220 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 POLR1BQ9H9Y6 1135 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 THAP1Q9NVV9 213 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 CD274Q9NZQ7 290 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 TAC3Q9UHF0 121 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 SATB2Q9UPW6 733 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 BTRCQ9Y297 605 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 PCDHGA8Q9Y5G5 932 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 AKAP13Q12802 2813 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 CHD8Q9HCK8 2581 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 GMNCA6NCL1 334 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 NCF1BA6NI72 391 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 SLC9B1P1A6NJY1 282 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 A8MT66 165 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 NCF1CA8MVU1 366 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 SUPT3HB4E1H0 165 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 SUPT3HO75486 399 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 FGF3P11487 239 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 GFAPP14136 432 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 NCF1P14598 390 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 ST6GAL1P15907 406 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 PSMB5P28074 263 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 GGT5P36269 586 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 MLLT3P42568 568 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 LSSP48449 732 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 ABATP80404 500 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 STX3Q13277 289 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 CAMK2BQ13554 666 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 NAE1Q13564 534 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 SETDB1Q15047 1291 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 CHI3L2Q15782 390 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 TMTC4Q5T4D3 741 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 ICE2Q659A1 982 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 FAM129CQ86XR2 697 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 D2HGDHQ8N465 521 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 UBTD2Q8WUN7 234 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 EXT2Q93063 718 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 RHBDF1Q96CC6 855 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 TCTN2Q96GX1 697 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 CNDP1Q96KN2 507 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 C7orf26Q96N11 449 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 ZNF317Q96PQ6 595 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 MIPEPQ99797 713 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 ACAT2Q9BWD1 397 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 SGPP1Q9BX95 441 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 CHRNA10Q9GZZ6 450 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 NSRP1Q9H0G5 558 aaKnown RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 EPN3Q9H201 632 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 PDE7BQ9NP56 450 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 WWOXQ9NZC7 414 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 STK38LQ9Y2H1 464 aa14.93□□□□□ -0.02
SS18-216ENST00000580751 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.93□□□□□ -0.02
SS18-216ENST00000580751 KIF26BQ2KJY2 2108 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 EFCAB7A8K855 629 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 B4E171 279 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 SNNO75324 88 aaPredicted RBP14.92□□□□□ -0.02
SS18-216ENST00000580751 PVRP15151 417 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 MAGP20916 626 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 BGNP21810 368 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 TSPAN7P41732 249 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 PIK3CGP48736 1102 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 HK2P52789 917 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 RAB15P59190 212 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 GABREP78334 506 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 ACY1Q03154 408 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 PRDX1Q06830 199 aaKnown RBP14.92□□□□□ -0.02
SS18-216ENST00000580751 PCBP2Q15366 365 aaKnown RBP eCLIP14.92□□□□□ -0.02
SS18-216ENST00000580751 LCTLQ6UWM7 567 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 LSMEM2Q8N112 164 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 HAUS8Q9BT25 410 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 DRC3Q9H069 523 aa14.92□□□□□ -0.02
SS18-216ENST00000580751 MRPS30Q9NP92 439 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms