RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	ACAT2	Q9BWD1	397 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	FAM129A	Q9BZQ8	928 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PCBD2	Q9H0N5	130 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	POPDC3	Q9HBV1	291 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SLC6A20	Q9NP91	592 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SMYD2	Q9NRG4	433 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TXLNG	Q9NUQ3	528 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	STOX2	Q9P2F5	926 aa	Predicted RBP	13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TAC3	Q9UHF0	121 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	POLH	Q9Y253	713 aa		13.07	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SNRNP200	O75643	2136 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	FAM95C	A0A1B0GW59	222 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501		C9J4A7	227 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	C1QA	P02745	245 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ENO2	P09104	434 aa	Predicted RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	FURIN	P09958	794 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	EZR	P15311	586 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ZNF37A	P17032	561 aa	Predicted RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HIST1H2AD	P20671	130 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CCND1	P24385	295 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HRH2	P25021	359 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	EMP3	P54852	163 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	POLE2	P56282	527 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	AP1S2	P56377	157 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	GPX6	P59796	221 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	YBX1	P67809	324 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	POU4F1	Q01851	419 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	GUCY2D	Q02846	1103 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	DEFB109B	Q30KR1	87 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	FAM214A	Q32MH5	1076 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	GLE1	Q53GS7	698 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TMEM207	Q6UWW9	146 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CAPN12	Q6ZSI9	719 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PAQR7	Q86WK9	346 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	NKAP	Q8N5F7	415 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ENDOV	Q8N8Q3	282 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PPFIBP2	Q8ND30	876 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	KIF18A	Q8NI77	898 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	VPS39	Q96JC1	886 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HIST1H2AH	Q96KK5	128 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HIST1H2AJ	Q99878	128 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	H2AFJ	Q9BTM1	129 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TRIM54	Q9BYV2	358 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	LRRC4C	Q9HCJ2	640 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ZDHHC18	Q9NUE0	388 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	IRAK4	Q9NWZ3	460 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TCFL5	Q9UL49	500 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SNX7	Q9UNH6	387 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	NOVA2	Q9UNW9	492 aa	Known RBP	13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PADI2	Q9Y2J8	665 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	KCNMB2	Q9Y691	235 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SPTB	P11277	2137 aa		13.06	□□□□□ -0.32
CSNK1D-208	ENST00000578501		A0A1B0GX78	115 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ESYT3	A0FGR9	886 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CXorf49	A8MYA2	514 aa	Predicted RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	STX2	P32856	288 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	GP5	P40197	560 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TAS2R39	P59534	338 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	RPS18	P62269	152 aa	Known RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TSTA3	Q13630	321 aa	Predicted RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PHKG1	Q16816	387 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	NKAIN1	Q4KMZ8	207 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	WASHC2D	Q5SRD0	308 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ATP1A1-AS1	Q5TC04	95 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	AGTRAP	Q6RW13	159 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SBSN	Q6UWP8	590 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CEP128	Q6ZU80	1094 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	RELL1	Q8IUW5	271 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	APLF	Q8IW19	511 aa	Predicted RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TTC29	Q8NA56	475 aa	Predicted RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ADAMTS17	Q8TE56	1095 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	SGPP1	Q9BX95	441 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TXNDC16	Q9P2K2	825 aa		13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	DHCR7	Q9UBM7	475 aa	Known RBP	13.05	□□□□□ -0.32
CSNK1D-208	ENST00000578501	LOC105369274	A0A096LPK9	316 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	LOC102723532	A0A0G2JNH3	316 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501		A0A0J9YVX5	310 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	HYKK	A2RU49	373 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CDC14C	A4D256	554 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CTAGE15	A4D2H0	777 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CLEC18A	A5D8T8	446 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PABPN1L	A6NDY0	278 aa	Known RBP	13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ENO4	A6NNW6	628 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	DSCR3	O14972	297 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	NRP2	O60462	931 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	KLF7	O75840	302 aa	Predicted RBP	13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	WISP3	O95389	354 aa	Predicted RBP	13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	CTAGE8	P0CG41	777 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PIM1	P11309	404 aa	Predicted RBP	13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	ALAS2	P22557	587 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PGGT1B	P53609	377 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	VSX2	P58304	361 aa	Predicted RBP	13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	TBPL1	P62380	186 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	KCNAB2	Q13303	367 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	NAB1	Q13506	487 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	IL10RA	Q13651	578 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	PRTG	Q2VWP7	1150 aa		13.04	□□□□□ -0.32
CSNK1D-208	ENST00000578501	THEMIS2	Q5TEJ8	643 aa		13.04	□□□□□ -0.32

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