RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SYNDIG1Q9H7V2 258 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 PDE7BQ9NP56 450 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 KCNK9Q9NPC2 374 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 ANGPTL3Q9Y5C1 460 aa13.35□□□□□ -0.27
LINC01543-201ENST00000578367 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 IGHV5-51A0A0C4DH38 117 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 KRT87PA6NCN2 255 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 B4E171 279 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 E2F3O00716 465 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 CCNT2O60583 730 aaKnown RBP13.34□□□□□ -0.27
LINC01543-201ENST00000578367 TRIM13O60858 407 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 CREB1P16220 341 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
LINC01543-201ENST00000578367 TSPAN7P41732 249 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 CCR8P51685 355 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 GALNT1Q10472 559 aaPredicted RBP13.34□□□□□ -0.27
LINC01543-201ENST00000578367 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
LINC01543-201ENST00000578367 CCDC157Q569K6 752 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 TTMPQ5BVD1 217 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 ZNF678Q5SXM1 525 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 PHF19Q5T6S3 580 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 KIAA1614Q5VZ46 1190 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 ATG9BQ674R7 924 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
LINC01543-201ENST00000578367 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 PYCR2Q96C36 320 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 FCRL4Q96PJ5 515 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 NTMT1Q9BV86 223 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 ACAT2Q9BWD1 397 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 SLC17A7Q9P2U7 560 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 PCTPQ9UKL6 214 aa13.34□□□□□ -0.27
LINC01543-201ENST00000578367 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.27
LINC01543-201ENST00000578367 SLC9B1P1A6NJY1 282 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 SRPX2O60687 465 aaPredicted RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 CSO75390 466 aaKnown RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 OTCP00480 354 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 BPGMP07738 259 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 C1GALT1C1LP0DN25 315 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 ST6GAL1P15907 406 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 MAGP20916 626 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 PSMB5P28074 263 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 SERPINB1P30740 379 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 HNF4AP41235 474 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 GDF5P43026 501 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 LSSP48449 732 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 SERPINB4P48594 390 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 AGTR2P50052 363 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 RAB15P59190 212 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 RPS15AP62244 130 aaKnown RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 GTF2H2Q13888 395 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 IL11RAQ14626 422 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 LIPJQ5W064 366 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 GTF2H2CQ6P1K8 395 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 IGF2-ASQ6U949 168 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 NXPE4Q6UWF7 544 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 SLCO4C1Q6ZQN7 724 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 TAX1BP1Q86VP1 789 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 PAQR7Q86WK9 346 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 KIRREL3Q8IZU9 778 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 KRT78Q8N1N4 520 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 TTLQ8NG68 377 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 WDR36Q8NI36 951 aaKnown RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 PPP4R1Q8TF05 950 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 ZNF483Q8TF39 744 aaPredicted RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 PTCD3Q96EY7 689 aaKnown RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 CNDP1Q96KN2 507 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 NRTNQ99748 197 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 AIF1LQ9BQI0 150 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 FANCEQ9HB96 536 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 TMEM9Q9P0T7 183 aa13.33□□□□□ -0.28
LINC01543-201ENST00000578367 CNOT1A5YKK6 2376 aaKnown RBP13.33□□□□□ -0.28
LINC01543-201ENST00000578367 IGKV1-8A0A0C4DH67 115 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 TXNDC9O14530 226 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
LINC01543-201ENST00000578367 NPHS1O60500 1241 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 WFS1O76024 890 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 EBLN1P0CF75 366 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 GRK2P25098 689 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 PKNOX1P55347 436 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 PPP1CAP62136 330 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 PCLAFQ15004 111 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 HIST2H2ACQ16777 129 aaPredicted RBP13.32□□□□□ -0.28
LINC01543-201ENST00000578367 GGTA1PQ4G0N0 100 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 TCTE1Q5JU00 501 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 MANEAQ5SRI9 462 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 HHATQ5VTY9 493 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 FCRL6Q6DN72 434 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 HIST2H2AA3Q6FI13 130 aa13.32□□□□□ -0.28
LINC01543-201ENST00000578367 RNF44Q7L0R7 432 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms