RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 TIPARPQ7Z3E1 657 aaKnown RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 SYVN1Q86TM6 617 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 SLC26A11Q86WA9 606 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 KRT222Q8N1A0 295 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 LMNTD1Q8N9Z9 388 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 OR9A1PQ8NGU1 263 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 PROKR1Q8TCW9 393 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 MCOLN3Q8TDD5 553 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 NAT14Q8WUY8 206 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 JPH3Q8WXH2 748 aaPredicted RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 THAP4Q8WY91 577 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 SMPDL3AQ92484 453 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 TTC9Q92623 222 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 DLG3Q92796 817 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 NACC2Q96BF6 587 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 CERS2Q96G23 380 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 IP6K3Q96PC2 410 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 KRT12Q99456 494 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 AARSD1Q9BTE6 412 aaKnown RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 SLC12A9Q9BXP2 914 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 TRIM54Q9BYV2 358 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 FAM129AQ9BZQ8 928 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 BHLHE41Q9C0J9 482 aaPredicted RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 SLC7A5P2Q9GIP4 190 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 TSPYL1Q9H0U9 437 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 XKR8Q9H6D3 395 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 IARS2Q9NSE4 1012 aaKnown RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 TEX264Q9Y6I9 313 aa6.79□□□□□ -1.32
CASC3-205ENST00000577605 ZNF106Q9H2Y7 1883 aaKnown RBP6.79□□□□□ -1.32
CASC3-205ENST00000577605 LOC101059948A0A1B0GTJ6 334 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PABPN1LA6NDY0 278 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 TMEM150CB9EJG8 249 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 GOLGA8KD6RF30 607 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 GOLGA8TH3BQL2 631 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 GFYI3L273 518 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 MYO1CO00159 1063 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 AGRPO00253 132 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 TXNDC9O14530 226 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 TTI1O43156 1089 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 KLHL41O60662 606 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 NIPSNAP2O75323 286 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 OR2B3O76000 313 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 HAUS5O94927 633 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 HIST1H2AGP0C0S8 130 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ERGP11308 486 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 LIFP15018 202 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ST6GAL1P15907 406 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 TCN2P20062 427 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 HIST1H2ADP20671 130 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 NME2P22392 152 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PTPN4P29074 926 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CMPK1P30085 196 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 DLSTP36957 453 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ELK3P41970 407 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CCR10P46092 362 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CSE1LP55060 971 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 IL2P60568 153 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PPP1CAP62136 330 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 MGAT5Q09328 741 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 GRB7Q14451 532 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 SF1Q15637 639 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 GPR19Q15760 415 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 WHAMMP3Q1A5X7 153 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 KLHL38Q2WGJ6 581 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 FAM214AQ32MH5 1076 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 TMEM95Q3KNT9 176 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 SOWAHCQ53LP3 525 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 FAM45BPQ6NSW5 357 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 RHBDD2Q6NTF9 364 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 BORAQ6PGQ7 559 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 SYT10Q6XYQ8 523 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ZNF517Q6ZMY9 492 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 ZBTB46Q86UZ6 589 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 VRK3Q8IV63 474 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 DENND6AQ8IWF6 608 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CNPY4Q8N129 248 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 DNAJC22Q8N4W6 341 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 GPATCH11Q8N954 259 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 MNS1Q8NEH6 495 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CFAP61Q8NHU2 1237 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 FAM45AQ8TCE6 357 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PYROXD1Q8WU10 500 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 APOBEC4Q8WW27 367 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 CDKL2Q92772 493 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 MED8Q96G25 268 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 VPS39Q96JC1 886 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 HIST1H2AHQ96KK5 128 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 SMAD5Q99717 465 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 HIST1H2AJQ99878 128 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms