RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, human

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-215	ENST00000576958	PAQR7	Q86WK9	346 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	OTUD6B	Q8N6M0	293 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	RAD51AP1	Q96B01	352 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	CABS1	Q96KC9	395 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	PKP4	Q99569	1192 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	ENAM	Q9NRM1	1142 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	AGPAT4	Q9NRZ5	378 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	SEMA3G	Q9NS98	782 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	OLAH	Q9NV23	265 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	TRPC4	Q9UBN4	977 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	TAC3	Q9UHF0	121 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	GNPTG	Q9UJJ9	305 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	MED16	Q9Y2X0	877 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	CELSR1	Q9NYQ6	3014 aa		11.44	□□□□□ -0.58
PRPF8-215	ENST00000576958	SCN3A	Q9NY46	2000 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	TACC2	O95359	2948 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	POLQ	O75417	2590 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	IGLV3-12	A0A075B6K2	115 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	IGHV1-45	A0A0A0MS14	117 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ERI2	A8K979	691 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	IDS	B3KWA1	339 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	MAP2K7	O14733	419 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	HAT1	O14929	419 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	NDUFS3	O75489	264 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	IPO7	O95373	1038 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	MATN4	O95460	622 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	WDPCP	O95876	746 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	IGHE	P01854	428 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	EDN3	P14138	238 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	PTMS	P20962	102 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	VARS	P26640	1264 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	VPS41	P49754	854 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	TNFSF10	P50591	281 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ARG2	P78540	354 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	BASP1	P80723	227 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	KIF5A	Q12840	1032 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	PCOLCE	Q15113	449 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	TMED2	Q15363	201 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	TLR1	Q15399	786 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	TCTE1	Q5JU00	501 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	SP5	Q6BEB4	398 aa	Predicted RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ZNF549	Q6P9A3	640 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	LRRC8B	Q6P9F7	803 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	CENPU	Q71F23	418 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	OTOA	Q7RTW8	1153 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	AGGF1	Q8N302	714 aa	eCLIP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	CSNK1A1L	Q8N752	337 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ZUFSP	Q96AP4	578 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	SLC22A18	Q96BI1	424 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ZFYVE21	Q9BQ24	234 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	HES7	Q9BYE0	225 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	EPS8L2	Q9H6S3	715 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	MRM3	Q9HC36	420 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	INTS7	Q9NVH2	962 aa	Known RBP	11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	GUCA1B	Q9UMX6	200 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	KLK4	Q9Y5K2	254 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	ADGRG4	Q8IZF6	3080 aa		11.43	□□□□□ -0.58
PRPF8-215	ENST00000576958	NSG1	A0A0A6YYJ2	146 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	TARM1	B6A8C7	271 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PRSS44	E7EML9	344 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	DNAJB6	O75190	326 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	GAS8	O95995	478 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	RPN2	P04844	631 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	STS	P08842	583 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	CD63	P08962	238 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	ERG	P11308	486 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	RPS3	P23396	243 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	5e-12	■■■■■ 27
PRPF8-215	ENST00000576958	STIP1	P31948	543 aa	Known RBP	11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	TTPA	P49638	278 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PGGT1B	P53609	377 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	EMP2	P54851	167 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	KLHL38	Q2WGJ6	581 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	SEL1L2	Q5TEA6	688 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	FAM180A	Q6UWF9	173 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	MBOAT1	Q6ZNC8	495 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	NEK10	Q6ZWH5	1172 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	DENND6A	Q8IWF6	608 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	SYCE1	Q8N0S2	351 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	CCDC89	Q8N998	374 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	OR9A4	Q8NGU2	314 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	HMGCLL1	Q8TB92	370 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	MMAB	Q96EY8	250 aa	Predicted RBP	11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	OR2A5	Q96R48	311 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PLCD4	Q9BRC7	762 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	RBCK1	Q9BYM8	510 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	MRPS30	Q9NP92	439 aa	Known RBP	11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PAK5	Q9P286	719 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PCYOX1	Q9UHG3	505 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	ANAPC5	Q9UJX4	755 aa		11.42	□□□□□ -0.58
PRPF8-215	ENST00000576958	PCDH17	O14917	1159 aa		11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	KDM1A	O60341	852 aa		11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	SRPX2	O60687	465 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	SEC24D	O94855	1032 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	SLC16A8	O95907	504 aa		11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	B3GALT4	O96024	378 aa		11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	ERVK-10	P10266	1014 aa		11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	PIM1	P11309	404 aa	Predicted RBP	11.41	□□□□□ -0.58
PRPF8-215	ENST00000576958	CMPK1	P30085	196 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms