RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 BEST3Q8N1M1 668 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 AMER3Q8N944 861 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 DNAAF3Q8N9W5 541 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 OR2L3Q8NG85 312 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 OR2A1Q8NGT9 310 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 AGAP11Q8TF27 550 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CA5BP1Q8WTZ4 195 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 ASZ1Q8WWH4 475 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 NRGNQ92686 78 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CCDC42Q96M95 316 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 NHEJ1Q9H9Q4 299 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 MKL2Q9ULH7 1088 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CDC14AQ9UNH5 594 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 TFR2Q9UP52 801 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 RUVBL1Q9Y265 456 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 PCDHGB6Q9Y5F9 930 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 NFS1Q9Y697 457 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 FAM169AQ9Y6X4 670 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 MACROD2A1Z1Q3 448 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 OR2W5A6NFC9 320 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 MROH6A6NGR9 719 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 ADAM10O14672 748 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 FOXS1O43638 330 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 ASNA1O43681 348 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 MAN1A2O60476 641 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 SEC24DO94855 1032 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 GOT2P00505 430 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 RPN2P04844 631 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 ERVK-10P10266 1014 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 ABOP16442 354 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 PSMA3P25788 255 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 BDKRB1P46663 353 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 SNRPNP63162 240 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TUBA3CQ13748 450 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 DSG2Q14126 1118 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 SEMA3AQ14563 771 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TUBA3EQ6PEY2 450 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 UNC5DQ6UXZ4 953 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 RNF44Q7L0R7 432 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 LDB1Q86U70 411 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 CDKL3Q8IVW4 592 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 CHERPQ8IWX8 916 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 KLHDC8BQ8IXV7 354 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 HDAC10Q969S8 669 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 RAD51AP1Q96B01 352 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 DNAJC7Q99615 494 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TREX2Q9BQ50 279 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 FERMT1Q9BQL6 677 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 DPH7Q9BTV6 452 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TUBB6Q9BUF5 446 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 ACAT2Q9BWD1 397 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 CARD6Q9BX69 1037 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TGIF2Q9GZN2 237 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 SLC2A6Q9UGQ3 507 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TEKT2Q9UIF3 430 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 TTC7AQ9ULT0 858 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 RUVBL2Q9Y230 463 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 KLK4Q9Y5K2 254 aa9.58□□□□□ -0.88
NPLOC4-220ENST00000576940 SCN2AQ99250 2005 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 A0A0A6YYC8 382 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 A0A0U1RQJ8 604 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 A0A1B0GTL3 188 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 OR2A25A4D2G3 310 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ASPDHA6ND91 283 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 I3L1I5 382 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 STK10O94804 968 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 SLCO2B1O94956 709 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 FKBP9O95302 570 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 C1orf105O95561 183 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 APOA4P06727 396 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 C8orf89P0DMQ9 161 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 CTNNA2P26232 953 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 AOAHP28039 575 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 EEF1DP29692 281 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 TPM4P67936 248 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 OR1C1Q15619 314 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 PARP6Q2NL67 630 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 BTBD16Q32M84 506 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ACER2Q5QJU3 275 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 AADACL2Q6P093 401 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 TTC23LQ6PF05 361 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 LANCL3Q6ZV70 420 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ZNF534Q76KX8 674 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 GALNTL5Q7Z4T8 443 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 FGD2Q7Z6J4 655 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 CRLF3Q8IUI8 442 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 SIAH3Q8IW03 269 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ZC3H7AQ8IWR0 971 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 MDS2Q8NDY4 140 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 OR13J1Q8NGT2 312 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 SCMH1Q96GD3 660 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ZNF354BQ96LW1 612 aa9.57□□□□□ -0.88
NPLOC4-220ENST00000576940 ZNF778Q96MU6 729 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms