RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 ZMYND12Q9H0C1 365 aa2.74□□□□□ -1.97
CDC27-218ENST00000575830 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
CDC27-218ENST00000575830 CCL27Q9Y4X3 112 aa2.74□□□□□ -1.97
CDC27-218ENST00000575830 ANGPTL3Q9Y5C1 460 aa2.74□□□□□ -1.97
CDC27-218ENST00000575830 ANTXRLA6NF34 631 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SHISA7A6NL88 538 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 E9PQ18 207 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SOCS3O14543 225 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 TEX28O15482 410 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 TADA2AO75478 443 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CLDN1O95832 211 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 OR52Z1P0C646 297 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SLC2A2P11168 524 aaPredicted RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 DARSP14868 501 aaKnown RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 MYOGP15173 224 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 UGT1A4P22310 534 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 HLA-FP30511 346 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 MATR3P43243 847 aaKnown RBP eCLIP2.73□□□□□ -1.97
CDC27-218ENST00000575830 CAPZA2P47755 286 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 RAB28P51157 221 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CYCSP99999 105 aaKnown RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 RALGDSQ12967 914 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 TRA2AQ13595 282 aaKnown RBP eCLIP2.73□□□□□ -1.97
CDC27-218ENST00000575830 SNAI3Q3KNW1 292 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 FASTKD1Q53R41 847 aaKnown RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 TCP11X2Q5H9J9 407 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 LCN1P1Q5VSP4 162 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CST9LP1Q5W188 147 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 ZNF772Q68DY9 489 aaPredicted RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 OR4A47Q6IF82 309 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 DET1Q7L5Y6 550 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CATSPERDQ86XM0 798 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 LGI2Q8N0V4 545 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 KCTD6Q8NC69 237 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SMAP2Q8WU79 429 aaPredicted RBP2.73□□□□□ -1.97
CDC27-218ENST00000575830 HDAC11Q96DB2 347 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 LPAR4Q99677 370 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 VGLL1Q99990 258 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CCDC3Q9BQI4 270 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SLC25A23Q9BV35 468 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 SLC2A11Q9BYW1 496 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 CHST11Q9NPF2 352 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 GSN-AS1Q9NRJ2 163 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.73□□□□□ -1.97
CDC27-218ENST00000575830 PPP1R3CQ9UQK1 317 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 TNNQ9UQP3 1299 aa2.73□□□□□ -1.97
CDC27-218ENST00000575830 IGHV3OR16-10A0A075B7F0 116 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 A0A087WUV0 522 aaPredicted RBP2.72□□□□□ -1.97
CDC27-218ENST00000575830 KPNA7A9QM74 516 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 ZNF195O14628 629 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 EPHB6O15197 1021 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 P4HA2O15460 535 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 PLOD3O60568 738 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 NXPH2O95156 264 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 DUS4LO95620 317 aaKnown RBP2.72□□□□□ -1.97
CDC27-218ENST00000575830 BAG3O95817 575 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 CPT2P23786 658 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 EDNRAP25101 427 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 DLK1P80370 383 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 CALCOCO2Q13137 446 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 TAB1Q15750 504 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 LETM2Q2VYF4 491 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 WLSQ5T9L3 541 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 LYSMD4Q5XG99 296 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 CDK20Q8IZL9 346 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 TTC30BQ8N4P2 665 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 RAB42Q8N4Z0 105 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 FAM89BQ8N5H3 189 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 VANGL1Q8TAA9 524 aaPredicted RBP2.72□□□□□ -1.97
CDC27-218ENST00000575830 MAPK15Q8TD08 544 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 PIK3R3Q92569 461 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 C18orf12Q96KH6 178 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 SPAG5Q96R06 1193 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 USP28Q96RU2 1077 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 NKX3-1Q99801 234 aaPredicted RBP2.72□□□□□ -1.97
CDC27-218ENST00000575830 ST6GALNAC4Q9H4F1 302 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 ACTL8Q9H568 366 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 PANK4Q9NVE7 773 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 CPSF3Q9UKF6 684 aaKnown RBP2.72□□□□□ -1.97
CDC27-218ENST00000575830 KLK13Q9UKR3 277 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 CEP350Q5VT06 3117 aa2.72□□□□□ -1.97
CDC27-218ENST00000575830 IL16Q14005 1332 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 MTMR11A4FU01 709 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 AP5Z1O43299 807 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 MYBL1P10243 752 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 EEF1B2P24534 225 aaKnown RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 OR3A2P47893 321 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 UBASH3AP57075 661 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 RASGEF1BQ0VAM2 473 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 TRAP1Q12931 704 aaKnown RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 MTF1Q14872 753 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 C2CD6Q53TS8 623 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 TCTE1Q5JU00 501 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 DOK6Q6PKX4 331 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 FRRS1Q6ZNA5 592 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 ZBTB49Q6ZSB9 765 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 LRRTM1Q86UE6 522 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 OR7A2PQ8NGA2 310 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms