RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 EPCAMP16422 314 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 EEF1B2P24534 225 aaKnown RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 AZGP1P25311 298 aaKnown RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 HLA-FP30511 346 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 TSFMP43897 325 aaKnown RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 DSCR10P59022 87 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 MYL7Q01449 175 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 FASTKD3Q14CZ7 662 aaKnown RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 NPTX1Q15818 432 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 GPR33Q49SQ1 333 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 ARMC4Q5T2S8 1044 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 KRT39Q6A163 491 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 LEKR1Q6ZMV7 388 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 MAML2Q8IZL2 1156 aaPredicted RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 KLHDC1Q8N7A1 406 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 OR7A2PQ8NGA2 310 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 GTF3AQ92664 365 aaKnown RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 OTUB1Q96FW1 271 aaPredicted RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 ZNF300Q96RE9 604 aaPredicted RBP4.01□□□□□ -1.77
CDC27-216ENST00000574304 MAP3K3Q99759 626 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 SLF1Q9BQI6 1058 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 SLC2A11Q9BYW1 496 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 MED20Q9H944 212 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 MOB4Q9Y3A3 225 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 CSNK1G3Q9Y6M4 447 aa4.01□□□□□ -1.77
CDC27-216ENST00000574304 MPTX1A8MV57 137 aa4□□□□□ -1.77
CDC27-216ENST00000574304 SOCS3O14543 225 aa4□□□□□ -1.77
CDC27-216ENST00000574304 CELF2O95319 508 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 RPL35AP18077 110 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 DNA2P51530 1060 aa4□□□□□ -1.77
CDC27-216ENST00000574304 LIMK1P53667 647 aa4□□□□□ -1.77
CDC27-216ENST00000574304 XGP55808 180 aa4□□□□□ -1.77
CDC27-216ENST00000574304 CALD1Q05682 793 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 ELAVL2Q12926 359 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 TRAP1Q12931 704 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 CALCOCO2Q13137 446 aa4□□□□□ -1.77
CDC27-216ENST00000574304 NFATC2Q13469 925 aa4□□□□□ -1.77
CDC27-216ENST00000574304 TMEM266Q2M3C6 531 aa4□□□□□ -1.77
CDC27-216ENST00000574304 MOGAT2Q3SYC2 334 aa4□□□□□ -1.77
CDC27-216ENST00000574304 GLIPR1L2Q4G1C9 344 aa4□□□□□ -1.77
CDC27-216ENST00000574304 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
CDC27-216ENST00000574304 RYBPQ8N488 228 aaPredicted RBP4□□□□□ -1.77
CDC27-216ENST00000574304 NOA1Q8NC60 698 aaKnown RBP4□□□□□ -1.77
CDC27-216ENST00000574304 KCTD6Q8NC69 237 aa4□□□□□ -1.77
CDC27-216ENST00000574304 PRSS33Q8NF86 280 aa4□□□□□ -1.77
CDC27-216ENST00000574304 NUP37Q8NFH4 326 aa4□□□□□ -1.77
CDC27-216ENST00000574304 NYXQ9GZU5 481 aa4□□□□□ -1.77
CDC27-216ENST00000574304 TEX10Q9NXF1 929 aaPredicted RBP4□□□□□ -1.77
CDC27-216ENST00000574304 TBC1D7Q9P0N9 293 aa4□□□□□ -1.77
CDC27-216ENST00000574304 A0A087WUV0 522 aaPredicted RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 A0A1B0GVY2 172 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 AP5Z1O43299 807 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 PI15O43692 258 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 IDH3BO43837 385 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 KRT33AO76009 404 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 SLCO2B1O94956 709 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 ATP1B1P05026 303 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 GATA1P15976 413 aaPredicted RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 SHC1P29353 583 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 RAB28P51157 221 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 RBPJQ06330 500 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 ACSM1Q08AH1 577 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 AIMP1Q12904 312 aaKnown RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 PRPF4BQ13523 1007 aaKnown RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 CDH18Q13634 790 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 RAPSNQ13702 412 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 MTF1Q14872 753 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 MTHFSDQ2M296 383 aaKnown RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 MFSD4BQ5TF39 518 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 PAQR6Q6TCH4 344 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 KIF6Q6ZMV9 814 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 RBPMS2Q6ZRY4 209 aaKnown RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 IL17RELQ6ZVW7 336 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 PCGF5Q86SE9 256 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 CATSPERDQ86XM0 798 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 XXYLT1Q8NBI6 393 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 KCNE4Q8WWG9 221 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 ROBO4Q8WZ75 1007 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 PROX1Q92786 737 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 HDAC11Q96DB2 347 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 PGAP3Q96FM1 320 aaPredicted RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 LRRC3BQ96PB8 259 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 GPATCH1Q9BRR8 931 aaKnown RBP3.99□□□□□ -1.77
CDC27-216ENST00000574304 DCTN5Q9BTE1 182 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 GSN-AS1Q9NRJ2 163 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 TXNDC16Q9P2K2 825 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 KLK13Q9UKR3 277 aa3.99□□□□□ -1.77
CDC27-216ENST00000574304 COL5A2P05997 1499 aaPredicted RBP3.98□□□□□ -1.77
CDC27-216ENST00000574304 SNX3O60493 162 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 RPS6KA5O75582 802 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 ATP6AP2O75787 350 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 OR52Z1P0C646 297 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 MYBL1P10243 752 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 CPT2P23786 658 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 RAD52P43351 418 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 TMEM50BP56557 158 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 CLDN15P56746 228 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 SLC8A3P57103 927 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 MS4A2Q01362 244 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms