RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 IL22RA1Q8N6P7 574 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 KCTD4Q8WVF5 259 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 PMEPA1Q969W9 287 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 PTERQ96BW5 349 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 RHBDF1Q96CC6 855 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 NAF1Q96HR8 494 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZFYVE21Q9BQ24 234 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 CAPS2Q9BXY5 557 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 FAM60AQ9NP50 221 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 IGSF5Q9NSI5 407 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 TMEM184CQ9NVA4 438 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 EURLQ9NYK6 297 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 NUDT4Q9NZJ9 180 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 PILRAQ9UKJ1 303 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 RAXQ9Y2V3 346 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 KCNE2Q9Y6J6 123 aa12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 MAP1BP46821 2468 aaKnown RBP12.26□□□□□ -0.45
TRAPPC1-206ENST00000573989 OR2A25A4D2G3 310 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 SUPT3HB4E1H0 165 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 TXNDC9O14530 226 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 KLK10O43240 276 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 RAD1O60671 282 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 CDH16O75309 829 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 SUPT3HO75486 399 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 NUDT17P0C025 328 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 GCAP28676 217 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 GLRBP48167 497 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 CCR8P51685 355 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 ARSFP54793 590 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 UCNP55089 124 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 IRF9Q00978 393 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 DLG1Q12959 904 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 RASA2Q15283 850 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 OR4D1Q15615 310 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 DEFB110Q30KQ9 67 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 PTCHD3Q3KNS1 767 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 YOD1Q5VVQ6 348 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 RNF44Q7L0R7 432 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 THOC6Q86W42 341 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 DTX1Q86Y01 620 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 TDRPQ86YL5 185 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 MCATQ8IVS2 390 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 CACNA2D3Q8IZS8 1091 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 RIBC1Q8N443 379 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 TTC29Q8NA56 475 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 PDPRQ8NCN5 879 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 OR1L3Q8NH93 324 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 EXT2Q93063 718 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 RERGQ96A58 199 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 KIAA1143Q96AT1 154 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 PYCR2Q96C36 320 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 CLIP3Q96DZ5 547 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 SELENOSQ9BQE4 189 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 EFHD1Q9BUP0 239 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 SLC6A20Q9NP91 592 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 TMCO1Q9UM00 188 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 SRPK3Q9UPE1 567 aa12.25□□□□□ -0.45
TRAPPC1-206ENST00000573989 A0A087WV48 116 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 A0A0J9YVX5 310 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 H7BY64 318 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 TAF4O00268 1085 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 SEC16AO15027 2179 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZSCAN9O15535 394 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 STK16O75716 305 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 WDR47O94967 919 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 DLGAP3O95886 979 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 GFAPP14136 432 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 NPPBP16860 134 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 KRT15P19012 456 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 GGT5P36269 586 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 GABRA4P48169 554 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 RPS15AP62244 130 aaKnown RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ABHD18Q0P651 414 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 GRM7Q14831 915 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 MANEAQ5SRI9 462 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 FRYQ5TBA9 3013 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZNF425Q6IV72 752 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 MREGQ8N565 214 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZNF655Q8N720 491 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 SLC5A11Q8WWX8 675 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 SCYL1Q96KG9 808 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 LRFN5Q96NI6 719 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 PRAP1Q96NZ9 151 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ATOH8Q96SQ7 321 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 DPH2Q9BQC3 489 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 NDC1Q9BTX1 674 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 SPRY4Q9C004 299 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 TXLNGQ9NUQ3 528 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
TRAPPC1-206ENST00000573989 PADI1Q9ULC6 663 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms