RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 TBPL1P62380 186 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 PPP2R2AP63151 447 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 GABREP78334 506 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 ABATP80404 500 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 ACY1Q03154 408 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 PCBP2Q15366 365 aaKnown RBP eCLIP12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 NUDCD3Q8IVD9 361 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 FAM20CQ8IXL6 584 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 LSMEM2Q8N112 164 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 OR2A1Q8NGT9 310 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 NXPE2Q96DL1 559 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 CCDC126Q96EE4 140 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 SLC41A2Q96JW4 573 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 TRAPPC9Q96Q05 1148 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 TMEM79Q9BSE2 394 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 HAUS8Q9BT25 410 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 MECRQ9BV79 373 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 SGPP1Q9BX95 441 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 NRSN2Q9GZP1 204 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 TWSG1Q9GZX9 223 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 PDE7BQ9NP56 450 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 MRPS30Q9NP92 439 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 PISDQ9UG56 409 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 TAC3Q9UHF0 121 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 MID2Q9UJV3 735 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 SATB2Q9UPW6 733 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 ASB1Q9Y576 335 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 ANGPTL3Q9Y5C1 460 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 PCDHGA8Q9Y5G5 932 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 ACACBO00763 2458 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 IGF2RP11717 2491 aa12.42□□□□□ -0.42
NPLOC4-214ENST00000573876 SNRNP200O75643 2136 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 H3BQF6 201 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 STX16-NPEPL1H3BU86 382 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 K7EPI3 171 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 STX16O14662 325 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 TRIM13O60858 407 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SUPT7LO94864 414 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 APC2O95996 2303 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 BPGMP07738 259 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 NEFHP12036 1026 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PVRP15151 417 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 ST6GAL1P15907 406 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PSMB5P28074 263 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SLC6A12P48065 614 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SERPINB4P48594 390 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 MAPK10P53779 464 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 NAGLUP54802 743 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SHC2P98077 582 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PRDX1Q06830 199 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PCLAFQ15004 111 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 ZNF678Q5SXM1 525 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 TMEM164Q5U3C3 297 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PRAMEF13Q5VWM6 474 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 ICE2Q659A1 982 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 FIGLAQ6QHK4 219 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 C17orf64Q86WR6 236 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 TEX9Q8N6V9 391 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 CCNYL1Q8N7R7 359 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 C19orf47Q8N9M1 422 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SNX31Q8N9S9 440 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 OR2L3Q8NG85 312 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PPP4R1Q8TF05 950 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 N4BP2L2Q92802 583 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 ZUFSPQ96AP4 578 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 TCTN2Q96GX1 697 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 OR4K3Q96R72 315 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 KLHL25Q9H0H3 589 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 FANCEQ9HB96 536 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 DNAJC11Q9NVH1 559 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 OPTCQ9UBM4 332 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 BTRCQ9Y297 605 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
NPLOC4-214ENST00000573876 SEC16AO15027 2179 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 DHRS4L1P0CG22 281 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 HGFP14210 728 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 EPB42P16452 691 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 NR1D1P20393 614 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 MAGP20916 626 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 HRH2P25021 359 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 CDH13P55290 713 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 RAB15P59190 212 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 DNAJB13P59910 316 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 HERVK_113P63132 956 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 NFKB2Q00653 900 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 FOXK2Q01167 660 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 MC2RQ01718 297 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 FOXM1Q08050 763 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 UNC50Q53HI1 259 aa12.4□□□□□ -0.42
NPLOC4-214ENST00000573876 LIPMQ5VYY2 423 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms