RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NELL1Q92832 810 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 PANX1Q96RD7 426 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 SIGLEC11Q96RL6 698 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 KCTD5Q9NXV2 234 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 TRPM5Q9NZQ8 1165 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 SCHIP1Q9P0W5 487 aaPredicted RBP18.5■□□□□ 0.55
SCARF1-206ENST00000573852 KDM1AO60341 852 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 FKBP9O95302 570 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 AMD1P17707 334 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 PRPH2P23942 346 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 CCR7P32248 378 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 OR1D2P34982 312 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 SPAM1P38567 509 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 RPP38P78345 283 aaKnown RBP18.5■□□□□ 0.55
SCARF1-206ENST00000573852 NOXRED1Q6NXP6 359 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 ZSWIM9Q86XI8 627 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 APCDD1Q8J025 514 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 PGBD3Q8N328 593 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 OVCA2Q8WZ82 227 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 DSN1Q9H410 356 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 CCNB1IP1Q9NPC3 277 aa18.5■□□□□ 0.55
SCARF1-206ENST00000573852 ZNF106Q9H2Y7 1883 aaKnown RBP18.5■□□□□ 0.55
SCARF1-206ENST00000573852 WNT3P56703 355 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 NPRL3Q12980 569 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 MTAPQ13126 283 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PDE12Q6L8Q7 609 aaKnown RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 ZNF621Q6ZSS3 439 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 UBE2R2Q712K3 238 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PLD3Q8IV08 490 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 RHOXF1Q8NHV9 184 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 RPS6KA6Q9UK32 745 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 VPS4AQ9UN37 437 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PCDHB7Q9Y5E2 793 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 GALTP07902 379 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 EFNA1P20827 205 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 MAPK1P28482 360 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 TRPC1P48995 793 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 FADDQ13158 208 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 BOP1Q14137 746 aaKnown RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 UGT8Q16880 541 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 SYT16Q17RD7 645 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PTCHD3Q3KNS1 767 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 GPR33Q49SQ1 333 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 GGTA1PQ4G0N0 100 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 FAHD1Q6P587 224 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 CBLL1Q75N03 491 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 EIF3MQ7L2H7 374 aaKnown RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 FAM9CQ8IZT9 166 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PCSK9Q8NBP7 692 aaKnown RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 DNASE1L2Q92874 299 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 ZHX1-C8orf76Q96EF9 292 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 PRDM8Q9NQV8 689 aa18.49■□□□□ 0.55
SCARF1-206ENST00000573852 THUMPD1Q9NXG2 353 aaKnown RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 MBD1Q9UIS9 605 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-206ENST00000573852 EFCAB9A8MZ26 197 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 SCN2BO60939 215 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 GPX2P18283 190 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 CST5P28325 142 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-206ENST00000573852 CD40LGP29965 261 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 B4GALNT1Q00973 533 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PROX2Q3B8N5 592 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 ENTHD1Q8IYW4 607 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 FAM32AQ9Y421 112 aaKnown RBP18.48■□□□□ 0.55
SCARF1-206ENST00000573852 HTR3EA5X5Y0 456 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 CLDN24A6NM45 220 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 YY2O15391 372 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 CPSF4O95639 269 aaKnown RBP18.48■□□□□ 0.55
SCARF1-206ENST00000573852 AOAHP28039 575 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 LIPAP38571 399 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 TUFMP49411 452 aaKnown RBP18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PPP5CP53041 499 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 ACLYP53396 1101 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PLD1Q13393 1074 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 IQCCQ4KMZ1 466 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PRSS36Q5K4E3 855 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 Q6ZPB1 254 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-206ENST00000573852 TPGS1Q6ZTW0 290 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 MSANTD1Q6ZTZ1 278 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 LRRC70Q7Z2Q7 622 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 CLECL1Q8IZS7 167 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 L3MBTL4Q8NA19 623 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PSMA8Q8TAA3 256 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 PITX2Q99697 317 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 REEP1Q9H902 201 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 SLCO3A1Q9UIG8 710 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 TMED5Q9Y3A6 229 aa18.48■□□□□ 0.55
SCARF1-206ENST00000573852 E9PQ18 207 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 CBSLP0DN79 551 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 CBSP35520 551 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 NSG1P42857 185 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 HNRNPFP52597 415 aaKnown RBP18.47■□□□□ 0.55
SCARF1-206ENST00000573852 ITGA1P56199 1179 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 MCFD2Q8NI22 146 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 SKA2Q8WVK7 121 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-206ENST00000573852 IPCEF1Q8WWN9 437 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-206ENST00000573852 TPD52L3Q96J77 140 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 DCSTAMPQ9H295 470 aa18.47■□□□□ 0.55
SCARF1-206ENST00000573852 ZBTB20Q9HC78 741 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-206ENST00000573852 SLC22A14Q9Y267 594 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms