RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CD9P21926 228 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CCR4P51679 360 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CSTF3Q12996 717 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 MLIPQ5VWP3 458 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TMEM198Q66K66 360 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 KRT73Q86Y46 540 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZC3H7AQ8IWR0 971 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 CPSF7Q8N684 471 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 ACVR1CQ8NER5 493 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 OR4A15Q8NGL6 344 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 NAF1Q96HR8 494 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 PPM1MQ96MI6 270 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ING2Q9H160 280 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 MBNL1Q9NR56 388 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 OTOL1A6NHN0 477 aaPredicted RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 MANBAO00462 879 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PROS1P07225 676 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 AOAHP28039 575 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 METAP1P53582 386 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 DNAJB13P59910 316 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PSME3P61289 254 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 RPS13P62277 151 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 BTN3A2P78410 334 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 VAC14Q08AM6 782 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 VPS26BQ4G0F5 336 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZNF549Q6P9A3 640 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ABHD13Q7L211 337 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 DHDDSQ86SQ9 333 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PDZD3Q86UT5 571 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 C10orf53Q8N6V4 93 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 FRS2Q8WU20 508 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 OTULINQ96BN8 352 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TPD52L3Q96J77 140 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TIMM29Q9BSF4 260 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 EPB41L4BQ9H329 900 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PDE7BQ9NP56 450 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 SEMA3GQ9NS98 782 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ADGRE2Q9UHX3 823 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 KIR2DS5A0A0G2JLQ3 304 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 A0A0G2JNG1 304 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 K7ESM1 405 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 KIR2DS3K7RE56 304 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 TLR4O00206 839 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 AP1G1O43747 822 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 HS6ST1O60243 411 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 MGRN1O60291 552 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 KLK1P06870 262 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 DPP6P42658 865 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ERVK-8P63133 956 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 KIR2DS5Q14953 304 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 CLNKQ7Z7G1 428 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ANKRD46Q86W74 232 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 SFTPA1Q8IWL2 248 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 BIRC7Q96CA5 298 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 LYSMD1Q96S90 227 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PKP4Q99569 1192 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 NPAS2Q99743 824 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 TBC1D10AQ9BXI6 508 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 TMEM150CB9EJG8 249 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 GBAP04062 536 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 KLK3P07288 261 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 GABRB3P28472 473 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 VSX2P58304 361 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 SLC9B1Q4ZJI4 515 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 TOR1AIP1Q5JTV8 583 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 INTS11Q5TA45 600 aaKnown RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 FAM174AQ8TBP5 190 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PTERQ96BW5 349 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ZNF382Q96SR6 550 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PRDM6Q9NQX0 595 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 STOX2Q9P2F5 926 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 RPS6KB2Q9UBS0 482 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PCDHGA2Q9Y5H1 932 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 C9J4A7 227 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 CER1O95813 267 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 FGF3P11487 239 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 F3P13726 295 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 VARSP26640 1264 aaKnown RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 PPP2CBP62714 309 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 PPP2CAP67775 309 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 IRX1P78414 480 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 ABATP80404 500 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 DOC2AQ14183 400 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 GNA13Q14344 377 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 FAM174BQ3ZCQ3 159 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 GPAT3Q53EU6 434 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 CTSL3PQ5NE16 218 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ADGRG6Q86SQ4 1221 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 AADATQ8N5Z0 425 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 FBXO15Q8NCQ5 510 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ATOH1Q92858 354 aaPredicted RBP9.79□□□□□ -0.84
SMG6-213ENST00000573166 VPS33AQ96AX1 596 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 TAAR2Q9P1P5 351 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms