RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SARGQ9BW04 601 aa22.58■■□□□ 1.21
RAB40C-212ENST00000569575 STRADBQ9C0K7 418 aa22.58■■□□□ 1.21
RAB40C-212ENST00000569575 C12orf65Q9H3J6 166 aaKnown RBP22.58■■□□□ 1.21
RAB40C-212ENST00000569575 ZNF768Q9H5H4 540 aaKnown RBP22.58■■□□□ 1.21
RAB40C-212ENST00000569575 BTRCQ9Y297 605 aa22.58■■□□□ 1.21
RAB40C-212ENST00000569575 CEP250Q9BV73 2442 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 IGHV5-10-1A0A0J9YXX1 117 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 GIPC1O14908 333 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 SIX3O95343 332 aaPredicted RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 GRIA3P42263 894 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 NAGLUP54802 743 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 PKNOX1P55347 436 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 HSD11B2P80365 405 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 INSM1Q01101 510 aaPredicted RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 CLCQ05315 142 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 EIF3IQ13347 325 aaKnown RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 PUM1Q14671 1186 aaKnown RBP eCLIP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 UNC50Q53HI1 259 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 ZC3H12BQ5HYM0 836 aaKnown RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 TMTC4Q5T4D3 741 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 NXPE4Q6UWF7 544 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 ZNF574Q6ZN55 896 aaPredicted RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 SLCO6A1Q86UG4 719 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 TAX1BP1Q86VP1 789 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 BPHLQ86WA6 291 aaPredicted RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 OR6Y1Q8NGX8 325 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 PPP1R14CQ8TAE6 165 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 ADAMTS14Q8WXS8 1223 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 NEIL2Q969S2 332 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 UBE2E3Q969T4 207 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 PTCD3Q96EY7 689 aaKnown RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 SLC41A2Q96JW4 573 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 TRAPPC9Q96Q05 1148 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 MAP3K3Q99759 626 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 PLCD4Q9BRC7 762 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 ACAT2Q9BWD1 397 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 NT5DC2Q9H857 520 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 IPPKQ9H8X2 491 aa22.57■■□□□ 1.2
RAB40C-212ENST00000569575 EML4Q9HC35 981 aaKnown RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 INTS9Q9NV88 658 aaKnown RBP22.57■■□□□ 1.2
RAB40C-212ENST00000569575 OR2A25A4D2G3 310 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 TMEM114B3SHH9 223 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 RASSF9O75901 435 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 EBLN1P0CF75 366 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 C1GALT1C1LP0DN25 315 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 NEFHP12036 1026 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 HOXB3P14651 431 aaPredicted RBP22.56■■□□□ 1.2
RAB40C-212ENST00000569575 EZRP15311 586 aaKnown RBP22.56■■□□□ 1.2
RAB40C-212ENST00000569575 HNF4AP41235 474 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ARL4DP49703 201 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 INHBCP55103 352 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 GFERP55789 205 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 WDR4P57081 412 aaKnown RBP22.56■■□□□ 1.2
RAB40C-212ENST00000569575 LCP2Q13094 533 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 C18orf21Q32NC0 220 aaPredicted RBP22.56■■□□□ 1.2
RAB40C-212ENST00000569575 KIAA1614Q5VZ46 1190 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ATG16L1Q676U5 607 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ZNF425Q6IV72 752 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 FIGLAQ6QHK4 219 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 SLCO4C1Q6ZQN7 724 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 GOLGA7Q7Z5G4 137 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 KRT78Q8N1N4 520 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 GALNT15Q8N3T1 639 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ATP6V1E2Q96A05 226 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ESAMQ96AP7 390 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 NRTNQ99748 197 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 AIF1LQ9BQI0 150 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 DPH7Q9BTV6 452 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 SYNDIG1Q9H7V2 258 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 PDE7BQ9NP56 450 aa22.56■■□□□ 1.2
RAB40C-212ENST00000569575 ATXN7L1Q9ULK2 861 aaPredicted RBP22.56■■□□□ 1.2
RAB40C-212ENST00000569575 KCNE1BA0A087WTH5 132 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 KLF11O14901 512 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 WFS1O76024 890 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 SERPINE1P05121 402 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 NELFEP18615 380 aaKnown RBP22.55■■□□□ 1.2
RAB40C-212ENST00000569575 IRF8Q02556 426 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 HIST2H2ACQ16777 129 aaPredicted RBP22.55■■□□□ 1.2
RAB40C-212ENST00000569575 GGTA1PQ4G0N0 100 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 HIST2H2AA3Q6FI13 130 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 FAM92BQ6ZTR7 304 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 FRMD7Q6ZUT3 714 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 D2HGDHQ8N465 521 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 CCNYL1Q8N7R7 359 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 C19orf47Q8N9M1 422 aaKnown RBP22.55■■□□□ 1.2
RAB40C-212ENST00000569575 L3MBTL4Q8NA19 623 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 TTLQ8NG68 377 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 ZNF382Q96SR6 550 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 PAIP2Q9BPZ3 127 aaKnown RBP22.55■■□□□ 1.2
RAB40C-212ENST00000569575 GATA5Q9BWX5 397 aaPredicted RBP22.55■■□□□ 1.2
RAB40C-212ENST00000569575 DRC3Q9H069 523 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 ADGRE2Q9UHX3 823 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 CLCA2Q9UQC9 943 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 TSC22D4Q9Y3Q8 395 aa22.55■■□□□ 1.2
RAB40C-212ENST00000569575 HEATR5BQ9P2D3 2071 aa22.54■■□□□ 1.2
RAB40C-212ENST00000569575 SPAARA0A1B0GVQ0 90 aa22.54■■□□□ 1.2
RAB40C-212ENST00000569575 SRPX2O60687 465 aaPredicted RBP22.54■■□□□ 1.2
RAB40C-212ENST00000569575 CLDN9O95484 217 aa22.54■■□□□ 1.2
RAB40C-212ENST00000569575 MT-CO3P00414 261 aa22.54■■□□□ 1.2
RAB40C-212ENST00000569575 CHN1P15882 459 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms